Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00740 ATGATTTCTTCTGGCAAAATCAAATCCATTGATTTTTACCGGAAAATTCCCAGAGATTTGACCGAGGCATCACTATCTGGAGCAGGACTATCCATAATAGCAGCACTCTCCATgatgtttttatttggaatGGAACTAAGTAATTATATGTCTGTCAGCACCTCCACATCTGTGATTGTTGACAAGAGTTCTGATGGGGACTTTTTACGTATAGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAATTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTGAATATAACAAAAACAGTTCGCAAGTTTTCTATTGATTCGAATTTAAGACCAACTGGCTCTGAGTTTCATTCAGGACCAGTTCCAAGCTCCATTAAGCATGATGATGAAGTGGATGACGAATTTACTGAAGGTTCCTTTTCACTCACAGGACATAATTTTGATAGATTGTCTCATCAGTTTCCCATTTtggttgtaaatttttttgctcCTTGGTGCTACTGGAGTCAACGCCtgAAACCTTCATGGGAGAAGACAGCAAAAATGATAAGAGAGAGatatgaTCCAGAAATAGATGGGCGAATCCTTTTGGCAAAGGTTGATTGCACTCAAGAAGCTGATCTATGCAGGAGGAATCACATACAAGGGTATCCGTCTATTCGCATCTTTCGTAAAGGAAGTGACGTCAGAGACGACCATGGACACCACGACCATGAGTCATATTATGGAGATCGAGATACAGATAGCCTATTGAAGTTTATGGAGAATTTAGTGACATCTCTCCCAACAGAATCTCGGAAACTAGCTTTAGAGGATAAGTCTAATGGAACAGATAGTGCAAAAAGACCAGCACCATCATCAGGTGGATGTAGAATTGAAGGATATGTGCGTGTCAAAAAGGTTCCTGGAGACTTAATCATTTCAGCTCGTTCTGATTCTCATTCCTTTGATGCTACTCAAATGAACATGTCACAtgtcataaataatttgtcaTTTGGAAGGAAAATCTCACCTAGGGTCATGAGTGACGCCAAGCGTTTGATACCTTATCTTGGTATCAGCCATGACAGGTTAAATGCCCGGTCATTCATCAATCAGCGTGATTTAGGACCAAATGTTACTATAGATCATTATCTTCAGATAGTTAAAACAGAGGTGATaactagaaaaaattataaattaattgaggaGTACGAGTACACAGCGCATAGCAGTCTGTCACAGAGTCTACACATTCCTGTGGCAAAGTTCCATCTCGAGCTCTCTCCCATGCAGGTCTTAATAACAGAAAATCAGAAgtctttttcccattttatcACAAATGTCTGTGCTATTATTGGGGGTATCTTCACGGTTGCTGGAATTATTGACTCAATTTTCCACCACACTATCAGAATGATGAAAAAAGTTGAGCTCGGCAAAAATTTTTG 1442 0.3752 MISSGKIKSIDFYRKIPRDLTEASLSGAGLSIIAALSMMFLFGMELSNYMSVSTSTSVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGSEFHSGPVPSSIKHDDEVDDEFTEGSFSLTGHNFDRLSHQFPILVVNFFAPWCYWSQRLKPSWEKTAKMIRERYDPEIDGRILLAKVDCTQEADLCRRNHIQGYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDSLLKFMENLVTSLPTESRKLALEDKSNGTDSAKRPAPSSGGCRIEGYVRVKKVPGDLIISARSDSHSFDATQMNMSHVINNLSFGRKISPRVMSDAKRLIPYLGISHDRLNARSFINQRDLGPNVTIDHYLQIVKTEVITRKNYKLIEEYEYTAHSSLSQSLHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGIFTVAGIIDSIFHHTIRMMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00740 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Bva09g00740 480 Gene3D Glutaredoxin 139 287 - -
Bva09g00740 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Bva09g00740 480 CDD PDI_a_family 146 258 - -
Bva09g00740 480 Pfam Thioredoxin 146 243 IPR013766 -
Bva09g00740 480 MobiDBLite consensus disorder prediction 269 292 - -
Bva09g00740 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Bva09g00740 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
Bva09g00740 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Bva09g00740 480 SUPERFAMILY Thioredoxin-like 140 261 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00740 Bva-Chr9 3781117 3788014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00740 - - gmx:100787595 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00740 09 3781117 3788014 Bva09g00740 09 3781117 3788014 ECH