Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00566 ATGGCGGTTGATAGTGAAAAATCTGGCTACGATGGGAAGGTTTGGAGCATTTGTAGAATGCCATTTTGGCAAACAAACCAGACTTCTCCATCTTCATCTTCCACATCTTCTATGCATAATGTTCATCTGCAAAACCAGAGTTTTCAATCTGTTGATAGATCCACTCGTCCTTCTTCGAGTTCTGTCTCTTCTGTGGCCAAGTCTCTGCTTCCTACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTTTACTTTCCCTATGAACCTGGTAAGCAAGTTAGGAGCGCAATCGCAATTAAAAACACTTGCAAGTCTCACGTTGCTTTCAAGTTCCAAACTACTGCGCCAAAGAGTTGTTACATGCGTCCTCCAGGTGGTTTACTTGCGCCTGGTGAAAGTATAATTGCCACTGTGTTCAAATTCGTGGAGCCACCAGAGAATAGCGAGAAACCAATTGATCAAAAGAGCAAGGTTAAGTTCAAAATCATGAGCTTGAAAGTGCAAGGCGAAATGGACTATGCGCCAGAGCTGTTTGACGAGCAAAGGGATCAAGTAGCAGTAGAGCAAATTTTGCGAGTTGTTTTTCTCGACCCAGAACGTTCTAGCCCTGCAATGGATAAACTTAAACGGCAGCTGGCTGAGGCTGAGGCTGCACTGGAAGCACGCAAAAAACCGATAGAGGAAACAGGTCCCCGAATAGTTGGAGAGGGACTCGTTATAGATGAATGGaaagaaagaagggaaagaTACCTGGCCCGGCAGCAGGTTGAAGGGGTCGATTCAGTGTA 791 0.4488 MAVDSEKSGYDGKVWSICRMPFWQTNQTSPSSSSTSSMHNVHLQNQSFQSVDRSTRPSSSSVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGLLAPGESIIATVFKFVEPPENSEKPIDQKSKVKFKIMSLKVQGEMDYAPELFDEQRDQVAVEQILRVVFLDPERSSPAMDKLKRQLAEAEAALEARKKPIEETGPRIVGEGLVIDEWKERRERYLARQQVEGVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00566 263 Gene3D Immunoglobulins 70 201 IPR013783 -
Bva09g00566 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
Bva09g00566 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 33 262 IPR016763 GO:0005789
Bva09g00566 263 SUPERFAMILY PapD-like 64 204 IPR008962 -
Bva09g00566 263 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Bva09g00566 263 MobiDBLite consensus disorder prediction 26 67 - -
Bva09g00566 263 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 33 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00566 Bva-Chr9 3015241 3018184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00566 - - gmx:100820576 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00566 09 3015241 3018184 Bva07g02072 07 17739142 17741928 BWGD
Bva09g00566 09 3015241 3018184 Bva09g00566 09 3015241 3018184 ECH