Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00560 ATGACTGATCTTGATTCTGAGTCCAACTTCCAGAAGAACTTTCACATCCCGAATTACATACTTGTACCAGAGTCGGCGGTTGAAAATCTTGAGAATAAATGTGCTGAAGCACCTAAATGTCCAATCTTAGTTTTCATTAACTCCAAGAGTGGTGGTCAACTGGGAGGGGACCTTTTAATAACATATCGGACACTTCTTAACCCCAATCAGGTTTTTGATTTGGGGGAAGAGGCTCCTGATGAAGTTCTACGCAGAATCTATTCTAACTTTGAAAACCTCAAACATCACGATGATCAATTGGCAATGCAGACGATGGGGAGGCTGAGATTAATTGTTGCAGGGGGTGATGGAACAGCAGGCTGGTTGCTTGGTGTTGTTTGTGATCTCAAATTATCTCATCCACCGCCAATAGCAACAGTTCCCTTGGGCACTGGAAATAATCTTCCATTTGCATTTGGTTGGGGGAAGAAGAATCCAGGGACGGATAAACAATCTGTCCTGTCATTTTTACATCAAGTTATGAAAGctaaggaaatgaaaatagacAACTGGCATATCCTAATGAGGATGAAAGCTCCAAAAGAAGGTTACTGTGACCCCATTGCACCTCTTGAGTTACCACATTCTTTGCATGCGTTCCGTCGTGTGTCTGAGGCAGATGAACTTAACCAGGCAACATCAAACTTTAAAAGCTTGTCTTTGTTTTCTACTCTCTGTTCATCCTTTGATGGTTGTATGGCCGTTCCTCAGGAAGGATACCACACTTTCCGTGGAGGATTTTGGAACTACTTCAGCATGGGAATGGATGCTCAAGTGTCATATGCATTTCATTCTGAACGAAAGCTTCATCCTGAGAAGTTCAAGAATCAGTTGGTTAATCAGAGTACTTATGCCAAGCTTGGATGCACACAAGGATGGTTTATGGCTTCTCTATTCCATCATAATTCGAGGAATATCGCGCAGCTTGCAAAAgtgaaaatcatgaaaaggcACGGTCAATGGCAAGACCTACACGTACCACAAAGCATCAGGTCAATTGTTTGTCTTAACTTGCCTAGCTTTTCTGGCGGACTGAACCCTTGGGGAACACCGAACAGCAAGAAGCGGCGTGATAGAGATTTGACGCCACCATTTGTAGACGATGGTCTTCTAGAGGTTGTTGGTTTTAGAGATGCCTGGCATGGGCTTGTTTTGCTTGCTCCTAATGGACATGGAACTCGTCTTGCTCAGGCGCATAGAATCCGCTTCGAGTTTCACAAAGTGGCAGCTGATCACACATTTATGAGGATCGATGGAGAACCTTGGAAGCAACCTCTCCCAGTCGACGATGATACTGTTGTGGTGGAGATATCTCACCTTGGCCAGGTCAACATGCTTGCCACTCATGACTGCAGGGCTAAAAGTGTGCGTGATCCGTCATCACTCCATcctgatgatgatgatgatgatagcAATGACGAAGATTCTGTTTCAGAGGAATTTCGGAAGTTTGGTGCAGCAGATACTTTTAAAATCCCAGATGAAGTTGATCTTTCTCATATTAGTTA 1547 0.4221 MTDLDSESNFQKNFHIPNYILVPESAVENLENKCAEAPKCPILVFINSKSGGQLGGDLLITYRTLLNPNQVFDLGEEAPDEVLRRIYSNFENLKHHDDQLAMQTMGRLRLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDKQSVLSFLHQVMKAKEMKIDNWHILMRMKAPKEGYCDPIAPLELPHSLHAFRRVSEADELNQATSNFKSLSLFSTLCSSFDGCMAVPQEGYHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFMASLFHHNSRNIAQLAKVKIMKRHGQWQDLHVPQSIRSIVCLNLPSFSGGLNPWGTPNSKKRRDRDLTPPFVDDGLLEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKVAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVNMLATHDCRAKSVRDPSSLHPDDDDDDSNDEDSVSEEFRKFGAADTFKIPDEVDLSHIS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00560 515 Pfam Diacylglycerol kinase catalytic domain 41 166 IPR001206 GO:0016301
Bva09g00560 515 Gene3D - 39 187 IPR017438 -
Bva09g00560 515 SMART dagk_c4b_2 262 434 IPR000756 GO:0004143|GO:0007205
Bva09g00560 515 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 37 190 IPR001206 GO:0016301
Bva09g00560 515 Gene3D - 259 442 - -
Bva09g00560 515 PIRSF DAG_kinase_plant 2 232 IPR016961 GO:0004143
Bva09g00560 515 PIRSF DAG_kinase_plant 231 465 IPR016961 GO:0004143
Bva09g00560 515 Pfam Diacylglycerol kinase accessory domain 260 434 IPR000756 GO:0004143|GO:0007205
Bva09g00560 515 PANTHER DIACYLGLYCEROL KINASE 250 514 IPR037607 GO:0004143|GO:0007165
Bva09g00560 515 PANTHER DIACYLGLYCEROL KINASE 5 225 IPR037607 GO:0004143|GO:0007165
Bva09g00560 515 PANTHER DIACYLGLYCEROL KINASE 250 514 - -
Bva09g00560 515 PANTHER DIACYLGLYCEROL KINASE 5 225 - -
Bva09g00560 515 SMART dagk_c4a_7 41 184 IPR001206 GO:0016301
Bva09g00560 515 MobiDBLite consensus disorder prediction 467 494 - -
Bva09g00560 515 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 40 441 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00560 Bva-Chr9 2991167 2999146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00560 1 508 Acyl Lipid Metabolism Gene Families AT2G20900 73.684 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00560 K00901 - twl:120000007 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00560 09 2991167 2999146 Bva07g02079 07 17759850 17768272 BWGD
Bva09g00560 09 2991167 2999146 Bva09g00560 09 2991167 2999146 ECH