Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00557 ATGGGCGTCGATGGGCCACCACAACGTCTTGAGGGAAAATATGCTGCAATTCTGGTCTGCTGGCTTCTTGGCAATGGATGTCTCTTCTCTTGGAATAGTATGCTAACGATGGAAGATTACTATAGCTACTTGTTTCCGGACTACCACCCCTCTCGGGTGTTGACTCTTGTATATCAGCCATTTGCTCTTGGAACACTTGCAATATTGGCATACAAGGAGGCAACAATCAATACTAGAAAAAGGAACCTATTTGGCTATAGTCTTTTTTTCATAAGTAGTCTTGGGGTGTTAATATTGGATTTATCAACTTCTGGTAAAGGAGGAATTGGAGCATTCATCGGTATATGTGCAATGAGTGCTGCATTTGGAGTTGCAGATGCCCATGTGCAAGGTGGAATGATTGGAGACCTTTCTTTCATGAGACCAGAGTTCATTCAGTCATTCCTTGCTGGTTTGGCAGCATCAGGTGCGCTAACCTCTGCTCTGAGGCTAATTACAAAGGCAGCATTTGAGAATTCCAAGAACGGCCTTCGCAAAGGAGCCATTTTATTCTTTGCTATATCAGCATTCTTTGAGCTTCTCTGCGTTATTCTTTATGCATTTGCCTTTCCAAGACtaccaattgtcaagtattaCCGTTCAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCTGCTGGTGGAATCCAGACAATATCTGAAGGAGCAAAACTAGAAGAGCGAAAGGGAAACAAGGACTTGTTACTGGAAAATATTGATTATGCATGTGACTTGTTCCTCATATATGTGTTAACACTATCTATTTTTCCCGGATTCTTGTCAGAAGACACAGGAGCACACAGTTTGGGTACATGGTATGCCCTTGTTTTGATAGCGATGTATAATGTGTGTGATCTGATTGGAAGATACATTCCACTCATAAAATTTCTGAAGCTGGAGTCTCGATGGCTGCTCACTACAACAATTCTTTCTCGTTTCTTACTCGTCCCAGCATTTTATTTCACAGCAAAATATGGTGACCAGGGTTGGATGATAATGTTAACGAGTGTCTTGGGGTTATCCAATGGTTACCTCACCGTTTGTATTCTCACTTCTGCACCAAAAGGTTACAAGGGGCCAGAACAAAATGCCTTGGGAAACCTATTGGTATTGTTTCTTCTTGGAGGCATCTTCGCAGGTGTCACACTTGACTGGTTGTGGTTGATTGGGAAGGGCTGGTG 1232 0.4213 MGVDGPPQRLEGKYAAILVCWLLGNGCLFSWNSMLTMEDYYSYLFPDYHPSRVLTLVYQPFALGTLAILAYKEATINTRKRNLFGYSLFFISSLGVLILDLSTSGKGGIGAFIGICAMSAAFGVADAHVQGGMIGDLSFMRPEFIQSFLAGLAASGALTSALRLITKAAFENSKNGLRKGAILFFAISAFFELLCVILYAFAFPRLPIVKYYRSKAASEGSKTVSADLAAGGIQTISEGAKLEERKGNKDLLLENIDYACDLFLIYVLTLSIFPGFLSEDTGAHSLGTWYALVLIAMYNVCDLIGRYIPLIKFLKLESRWLLTTTILSRFLLVPAFYFTAKYGDQGWMIMLTSVLGLSNGYLTVCILTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00557 410 Pfam Nucleoside transporter 121 404 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 382 406 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 122 144 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 150 170 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 345 361 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 7 409 IPR002259 GO:0005337|GO:0016021|GO:1901642
Bva09g00557 410 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 7 409 IPR030200 -
Bva09g00557 410 SUPERFAMILY MFS general substrate transporter 148 403 IPR036259 -
Bva09g00557 410 PIRSF ENT 7 408 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00557 Bva-Chr9 2971120 2974549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00557 4 408 Organic Solute Cotransporters AT4G05120 71.569 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00557 K15014 - tcc:18608597 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00557 09 2971120 2974549 Bva07g02082 07 17783953 17786391 BWGD
Bva09g00557 09 2971120 2974549 Bva09g00557 09 2971120 2974549 ECH