Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00541 ATGCCAGAAGCTCCCAAGCAGTACTTATCCCAGGATCCAAAAAATGAGCTTGAATTTGATGTCTGTACTGGTCATAATATTATCACTATCCCTCACGAGGACACCAACAAAAAAGCTTTAAAATACATTGAGGATGTCACCGACAACGGTGATGAAATCCAAAAAAGAGTTCTTGCTGAAATCCTTTCTCGTAGTGCCCAGTCTGAGTACCTGCAACGACATGGTCTAGGTGGGTGCACTGACCGGGACACTTTCAAGAAGGTCATGCCTGTAGTCACTTACGATGATATAAAGCCAGATATTGATCGTATTGCTAATGGTGACACTTCTCCAATTTTATGTTCTAAACCCATATCAGAATTCTTGACTAGCTCTGGAACGTCTGGTGGGGAGAGAAAACTGATGCCAACCATCGAAGAGGAGCTAGAGAGGAGGTCATTGCTTTATAGCCTTTTGATGCCAGTGATGAACCAGTTTGTACCGTGTTTGGACAAAGGCAAAGGGATgtactttttgtttattaaatcaGAAACCAACACCCCTGGAGGGCTGCTGGCTCGTCCTGTTTTAACTAGCTACTACAAAAGCTCCCATTTCAAGAACAGGCAATATGATCCTTATACTAACTACACCAGCCCCAATGAAACTATCCTCTGCCCAGATTCTTATCAAAGCATGTACTCTCAGTTACTCTGTGGCCTTTTTCAGAATGACCAAGTCCTTCGCGTTGGGGCTGTTTTTGCTTCTGGTTTTATCCGTGCCATTAAGTTCCTTGAAAAGCACTGGATTCCCTTGTGTAATGACATAAGAACCGGTACCATAGACCCCAAAATCACTGACCCATCAGTCAGAGAGGCTGTCGTGAAAATCCTCAAACCTAATCCAAAGCTTGCTTCTTTTATAGAAGCTGAATGCGCCAAAGGGTCATGGAAGGGGATCATAACTAGGTTATGGCCTAACACAAAGTATGTTGACGTTATTGTCACAGGAACAATGTCTCAGTACATTCCCATATTGGACTACTATAGTAATGGTCTCCCCCTTGTTTGCACCATGTATGCTTCTTCCGAGTGTTACTTTGGCCTCAATTTAAACCCTTTGTGTGAACCAAGTCAGGTCTCCTACACCATCATTCCCACAATGGCCTACTTTGAGTTCTTGCCACTTAACAGGAAAGATGGACACAACAATTCAGTTCCCCAACCAGTGCAAGAGTTAGTTGATCTTGTAGATGTGAAACTTGGTCAAGAGTATGAGCTTGTGGTCACCACTTATGCAGGCCTTTATAGGTATCGGGTTGGTGACATACTCAGGGTAGCAGGATTCAAGAACAAGGCACCTCAATTCAACTTTATATGCAGAAAGAATGTGGTTCTGAGCATTGATTCTGATAAAACTGATGAAGTTGAGCTACAAAATGCTGTGAAGAATGCAGCTAACCATCTTGCACAATTTGGTGCTTCGCTCACAGAATACACGAGCTACGCAGACACATCAACTATCCCTGGACACTATGTGTTGTACTGGGAGATTAGCTTGAGTGGGCAAACCCCAATtccttcatccatttttgagGACTGTTGCCTTGCAGTTGAAGAATCACTCAACAGTGTGTATCGGCAAGGCAGGGCTTCAGACCAGTCCATTGGCCCACTGGAGATCAAGATTGTGGAGAATGGAACATTTGACAAACTCATGGACTTTGCTCTTATACAAGGTGCATCCATAAATCAATACAAGACTCCTCGCTGTGTGAAATATGCTCCCATTGTAGACCTTTTGAACTCCAAAGTTGTTTCGAATTACTTCAGCCCAAAGATCCCGAAGTGGGCTCCTGGTTCCAGGAACTGGTGCACCCTTGACTG 1865 0.4311 MPEAPKQYLSQDPKNELEFDVCTGHNIITIPHEDTNKKALKYIEDVTDNGDEIQKRVLAEILSRSAQSEYLQRHGLGGCTDRDTFKKVMPVVTYDDIKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMNQFVPCLDKGKGMYFLFIKSETNTPGGLLARPVLTSYYKSSHFKNRQYDPYTNYTSPNETILCPDSYQSMYSQLLCGLFQNDQVLRVGAVFASGFIRAIKFLEKHWIPLCNDIRTGTIDPKITDPSVREAVVKILKPNPKLASFIEAECAKGSWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCEPSQVSYTIIPTMAYFEFLPLNRKDGHNNSVPQPVQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAANHLAQFGASLTEYTSYADTSTIPGHYVLYWEISLSGQTPIPSSIFEDCCLAVEESLNSVYRQGRASDQSIGPLEIKIVENGTFDKLMDFALIQGASINQYKTPRCVKYAPIVDLLNSKVVSNYFSPKIPKWAPGSRNWCTLD 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00541 621 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 29 617 - -
Bva09g00541 621 Pfam GH3 auxin-responsive promoter 43 586 IPR004993 -
Bva09g00541 621 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 29 617 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00541 Bva-Chr9 2880927 2883019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00541 40 604 EF-hand Containing Proteins AT1G23160 51.220 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00541 K14487 - qsu:112013268 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00541 09 2880927 2883019 Bva07g02098 07 17890287 17892709 BWGD
Bva09g00541 09 2880927 2883019 Bva09g00541 09 2880927 2883019 ECH