Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00474 ATGGCCAATCTACACAACTCTCTCCCATCCTATGAAAGGTTAAGGGTCAAGCACCATCTCCAAAGGGTAATGGATTCGGTGAATCTTATCCTACTCCTCTTGCTTCTTGGCCACCGTCTTATCTCTTTCACCAATTCCTACACTTTCACTTGCTTCCTTGCCTTCCTATGCGAAACATGCTTCGCCGTCTATTGGATTATCGTCATCAGCACCAAATGGACTCCTGCATCGACCAAAACGTACCCGGAACGTCTCTTTCAACGGGTATCTGAATCAGAGCTTCCTCCAGTGGATTTATTTGTAACAACGGCAGACCATGAACTTGAACCACCCATTATTACAGTGAACACTGTGCTATCTCTTTTGGCACTTGATTACCCAGCTAACAAGCTAGCTTGCTACGTTTCTGATGATGGTTGTTCCCCTCTTACCTTCTATGCTCTTGTGGAAGCCTCAAAATTTGCTAAGCTTTGGGTACCTTTCTGTAAGAAGTATAACGTGCAAACCAGAGCTCCCTTTAGATGCTTCTCTGACACATCCATTCTTAACAGTGCAGACTCATCACCAGAATTCAAGCAAGAATGGTTACAGATGAAGGATGAATATGAGCAGCTCGGCCGCAAAATTGCAGCTAGGAGCCAAAAACCAATTCCAAATGAGCTTGATGGAGAATTTGCGGCTTTCTCTAATACAGAGCGGAGAAATCATTCAACAATAATCAAAGTTATAtgggaaaataaagaaagtgatACAGATGATTTGCCGCATTTAATTTACATATCGAGAGAGAAGCGGCCAAAGCATCCTCATCATTTTAAGGCTGGTGCAATGAATGTTCTGACAAGAGTCTCCGGATTAATGACCAATGCTCCATTTATATTAAACGTAGACTGTGACATGTTTGTGAACAATCCCAAGATTGTTCTGCACGCTTTGTGCATTTTTCTAGATCCCAAGGGCGAAAAAGAAGTTGCCTTTGTTCAATGTCCCCAAAAATTCTATAATGGACCAAAGGACGATCCTTTAGGAAATCAGTTTGTGGTTTTTTACAAGTACATCGGGAGTGGAATGGCAGGAATCCAAGGGCCTTTTTATGGGGGAACAAACTGCTTCCATAGAAGAAAAGCTCTGTACGGCCTTCCTCCAGATGACTTCAAATATGGAAAGTTATCAGATAAGGACTTAATGCAAAAATTTGGAAGTTCACTAGCATTTGTTGAGTCGGCCGCTGAAGCTTTAGAGGGGAAGTCATATTCCCCAAACAATAACATTTCCAAGCCTCTTGAGGCAGCAAACCAGGTAGCTGGTTGTGGATATGAATCTGGCACCGCCTGGGGAGAACAGGTGGCCTGGATATATGGTTCGGCAACAGAGGATGTGATTACAGGGCTGAAAATGCATGCAAGAGGTTGGAGATCAGAACTGACTACACCAGAGCCAATTGCCTTTACGGGTTGTGCACCGATAGATGCCCCAACTTCTATGAGCCAGCAAAAGAGATGGACCTTAGGCTggcttgaaattttcttcagCAAGGGCTCCCCGATTTTTTGCACCCTCTTTGGAAAGCTCCAATTCAGGGAGTGCCTAATGTATTATTGTCTCATGTGCTGGGGCCTACGATCAGTGCCAGAAATATGCTATGCTGTTCTGCCAGCATATTGCATTATCACTAACTCCAATTTCATGCCCAAGGGTATTGGCTTGTGGGTTGCTGCTGCTCTTTATGTGATGTACAACAAAGAGCAACCAGGTGATGGTGATAGTGATGGTGCAGATTCAGATGCTGTTAGGTTCACTTTCGACAAGTCCCCAGTTTTTGTGCCAGGGACAACTATTTTGCTATTGCAATTAACAGCGCTGGTTATCAAATTGCTGGGGCTGCAACCACCGCCTCAAACGGGGAATGAAGCTGGGATGGGGGAGCTGTTCTGTAGTATTTACTTGGTAGTATGCTGTTGGCCATTTTTGAAAGGCTTGTTTGGTAAAGGGAAATATGGAATCCCTATATCTACCATATCCAAGTCAGCAGCCCTCGTATTTCTCTTTGTGCACTTCTGTACTAGCAAGTA 2072 0.4334 MANLHNSLPSYERLRVKHHLQRVMDSVNLILLLLLLGHRLISFTNSYTFTCFLAFLCETCFAVYWIIVISTKWTPASTKTYPERLFQRVSESELPPVDLFVTTADHELEPPIITVNTVLSLLALDYPANKLACYVSDDGCSPLTFYALVEASKFAKLWVPFCKKYNVQTRAPFRCFSDTSILNSADSSPEFKQEWLQMKDEYEQLGRKIAARSQKPIPNELDGEFAAFSNTERRNHSTIIKVIWENKESDTDDLPHLIYISREKRPKHPHHFKAGAMNVLTRVSGLMTNAPFILNVDCDMFVNNPKIVLHALCIFLDPKGEKEVAFVQCPQKFYNGPKDDPLGNQFVVFYKYIGSGMAGIQGPFYGGTNCFHRRKALYGLPPDDFKYGKLSDKDLMQKFGSSLAFVESAAEALEGKSYSPNNNISKPLEAANQVAGCGYESGTAWGEQVAWIYGSATEDVITGLKMHARGWRSELTTPEPIAFTGCAPIDAPTSMSQQKRWTLGWLEIFFSKGSPIFCTLFGKLQFRECLMYYCLMCWGLRSVPEICYAVLPAYCIITNSNFMPKGIGLWVAAALYVMYNKEQPGDGDSDGADSDAVRFTFDKSPVFVPGTTILLLQLTALVIKLLGLQPPPQTGNEAGMGELFCSIYLVVCCWPFLKGLFGKGKYGIPISTISKSAALVFLFVHFCTSK 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00474 690 Pfam Cellulose synthase 97 383 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva09g00474 690 Pfam Cellulose synthase 389 564 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva09g00474 690 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 583 688 - -
Bva09g00474 690 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 8 580 - -
Bva09g00474 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 228 385 IPR029044 -
Bva09g00474 690 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 580 - -
Bva09g00474 690 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 583 688 - -
Bva09g00474 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 112 513 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00474 Bva-Chr9 2519538 2522798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00474 1 686 Glycosyltransferase AT2G32530 42.894 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00474 - - gmx:100500469 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00474 09 2519538 2522798 Bva07g02168 07 18215444 18218745 BWGD
Bva09g00474 09 2519538 2522798 Bva09g00474 09 2519538 2522798 ECH