Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00456 ATGGAGGTCCCATCTGCTCCGAAGCTATACCTGCTTTCATGCTTATCAATACTCTTGCTTTCGTCCTCTCTTGCTCAAGCTGAGAAGGTCAAGTACTGCGATGGACAGGGAGACTATGCTGTGAAGGTAAGTGGAGTTAAAATATCACCTAACCCTGTGGCAAGGGGGAAGCCGGCTACCTTTCAGATCTCAGCTACTACTAATAAAGATATTTCTGGTGGGAAGTTAGTGATTGACGTGAAATACTTTGGGGTACAAGTCCATCAAGAAACTCATGATCTTTGTGAAGAAGTATCCTGTCCTGTTGCTTCAGGCAACTTCGTGCTTTCGCACACTCAAACATTGCCTTCATTTACCCCCCCGGGCTCCTATACActgaagatgaaaatggaggACGATAAGAAAGAGCAATTAACTTGCATTTCCTTCAACTTCAAAATCGGTTTTGGATCTTCGGTGTCTGATATCTA 470 0.4234 MEVPSAPKLYLLSCLSILLLSSSLAQAEKVKYCDGQGDYAVKVSGVKISPNPVARGKPATFQISATTNKDISGGKLVIDVKYFGVQVHQETHDLCEEVSCPVASGNFVLSHTQTLPSFTPPGSYTLKMKMEDDKKEQLTCISFNFKIGFGSSVSDI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00456 156 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 154 IPR039670 -
Bva09g00456 156 PANTHER PHOSPHATIDYLGLYCEROL/PHOSPHATIDYLINOSITOL TRANSFER PROTEIN DDB_G0282179 ISOFORM X1-RELATED 8 154 - -
Bva09g00456 156 Gene3D - 29 149 - -
Bva09g00456 156 Pfam ML domain 29 147 IPR003172 -
Bva09g00456 156 SUPERFAMILY E set domains 28 147 IPR014756 -
Bva09g00456 156 SMART pgtp_13 30 145 IPR003172 -
Bva09g00456 156 CDD PG-PI_TP 30 145 IPR033917 GO:0032366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00456 Bva-Chr9 2435316 2438419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00456 - - twl:120002269 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00456 09 2435316 2438419 Bva07g02187 07 18309061 18312297 BWGD
Bva09g00456 09 2435316 2438419 Bva09g00456 09 2435316 2438419 ECH