Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00440 ATGGAGCTAGAAACACTAAACCAGGGGCAGAAAGCAGTGCTACTAGCTCGTGGATGGGAGAGGCTAAAGGCTCTGCCTATTGTTTTGTTGACCAAGATGTTTGATATCTGTAAGATGACCACAAAGACTGGCCAAGATGACCCAAGAAGAGTCGTTCATTCCCTAAAAGTGGGACTTGCAATCGTCTTGGTGTCTCTGTTCTACTTATATCAACCACTGTATGAGAATTTTGGTCTCTATGCTATGTGGGCTGTAATGACTGTGGTGGTAGTTTTTGAGTTCTCTGTGGGAGCCACTCTTGGAAAAGGTCTGAACAGAGGGTTGGCAACATTGGTTGCTGGTGCTTTAGCTGTTGGAGCTCATTACTTGGCTAGCCTATCTGGTCAGACAATAGAACCCATATTGATTGGGTTCTTTGTCTTCGTGCAagCTGCAATAACAACGTTTATGCGGTTTTTTCCCAAGATGAAGGCAAGATATGATTATGGGCTGATAATATTTACTTTAAcattctctttgatttctgTATCTAGTTTCCGCGATGAAGAAGTAATAGATATGGCAAATAAGAGGTTGTCTACTATTTTCATCGGAGGCTCTGCTTCTGTTATGATATCCATTTTTATCTGTCCTGTGTGGGCCGGTGAAGATCTCCACAATTTGATTGCCGTCAACTTAGAAAAACTTGCCAACTTTTTACAAGTATTTGAATGTGAATATTTCAAAACATCATCAGAAGACTCGAGAGACAAAACTCAGAAGTCTATGATGGAAGAGTATAAAAGTGTCCTAAATTCAAAAAGCACCGAAGATTCTTTGGCTAATTTTGCCAGATGGGAACCGCGTCATGGAAGGTTTCAATTTCGTCATCCATGGCACCAATACCTTAAAATTGGAACACTTGCTCGCCAATGTGCCTACAGAATAGAAGCTTTAAACTGCCATCTTAATGCAGATATCCAAGCATCACCTGAATTTAGAGATATAATTCAAGAGGCATGCTCAGAAATGTGTTTGGAATCTGCCAAAGCTCTGAAGGAACTAGCATTGGTTGTGAAAACAATGACTAAGTCATCTATTGCAGAGACCCATATTGATACCTCTAGATCTGCAACAAAGAGCCTCAAGGAATTACTCCATTCAAACTTATGGAACGAAGCAGCTCTGCTAGCTGTGATACCAGTTGCCACAGTGGTTTCATTGCTAACTGATATTGTTAATTACACAGAACAAATTGCAGATGCTGTAAATGAGCTTGCTTCACTCACACATTTTGACGTTGGAGAAACCAGGACACCCCCGCTGAAGCCAGAATCCCCAAAATGTGAATGTGCTGAACAAGCTCCCAAGGCTGATGGCCCTCATGTTATCATTTCAGTTAGTGACTTAGCTCTAGCTAATTCAGTAGGGTGTGGAAAGCCTAAAGTTCCACCATCAACAATTTCATTAAAAGATTACTG 1460 0.4062 MELETLNQGQKAVLLARGWERLKALPIVLLTKMFDICKMTTKTGQDDPRRVVHSLKVGLAIVLVSLFYLYQPLYENFGLYAMWAVMTVVVVFEFSVGATLGKGLNRGLATLVAGALAVGAHYLASLSGQTIEPILIGFFVFVQAAITTFMRFFPKMKARYDYGLIIFTLTFSLISVSSFRDEEVIDMANKRLSTIFIGGSASVMISIFICPVWAGEDLHNLIAVNLEKLANFLQVFECEYFKTSSEDSRDKTQKSMMEEYKSVLNSKSTEDSLANFARWEPRHGRFQFRHPWHQYLKIGTLARQCAYRIEALNCHLNADIQASPEFRDIIQEACSEMCLESAKALKELALVVKTMTKSSIAETHIDTSRSATKSLKELLHSNLWNEAALLAVIPVATVVSLLTDIVNYTEQIADAVNELASLTHFDVGETRTPPLKPESPKCECAEQAPKADGPHVIISVSDLALANSVGCGKPKVPPSTISLKDY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00440 486 Pfam Aluminium activated malate transporter 42 420 IPR020966 GO:0015743
Bva09g00440 486 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 1 436 - -
Bva09g00440 486 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00440 Bva-Chr9 2322809 2324882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00440 30 421 Miscellaneous Gene Families AT1G08440 58.122 5.04e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00440 - - aprc:113859727 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00440 09 2322809 2324882 Bva07g02204 07 18441997 18444217 BWGD
Bva09g00440 09 2322809 2324882 Bva09g00440 09 2322809 2324882 ECH