Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00428 ATGTCCGTCAAGGACTGCGGCTACCACAAATATGAGCGGCGCAAACTGCTCCGCCGCATATTCGCCGGCGTCCTGGGCTTCATTGTCCTAGTACTCTTAGTAATCCTCTTAATTTGGGTCATCCTCAGACCCACCAAGCCCCGCTTCCTCCTCCAAGACGTTACCGTTCATGTCTTCAATGTGTCAACCTCCGGCGCCTCACCTTCTCCCACTTCTCCGACACCCAACACCGTCACCGTCACCATGCAAGCAACGCTCTTGGCTCACAACCCCAATGACCAAATCGGAGTTTATTACCAGAACCTCGACGTGTACGCCTCCTACCGGAACCAACAGATCTCGCTGGCGACTGTGCTGCCACCCACGTACCAAGATCATAATGATGATACTGTATGGTCTCCGTTCTTGTGCGGAAACGCCGTGCCGGTGTCGCCGTACGTGCTGAGTGCTCTGCAGCAGGATCAGAGTGCAGGAGGTATGTTGGTCAACGTGAAGGTCAACGGAAGGGTCAAATGGAAAGTTGGGACTTGGACATCTGGGAGGTACCATCTCTACGTGAACTGCCCGGCATATATAAGGTTCCCCGGTGACCCGAACATGACCATCGGAGTAGTGGGCACGGCGATTAAGTTTCAGATTCTACAAAGTTGCAGTGTCGACGTTTA 665 0.5353 MSVKDCGYHKYERRKLLRRIFAGVLGFIVLVLLVILLIWVILRPTKPRFLLQDVTVHVFNVSTSGASPSPTSPTPNTVTVTMQATLLAHNPNDQIGVYYQNLDVYASYRNQQISLATVLPPTYQDHNDDTVWSPFLCGNAVPVSPYVLSALQQDQSAGGMLVNVKVNGRVKWKVGTWTSGRYHLYVNCPAYIRFPGDPNMTIGVVGTAIKFQILQSCSVDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00428 221 PANTHER OS05G0367900 PROTEIN 5 221 IPR044839 GO:0098542
Bva09g00428 221 Pfam Late embryogenesis abundant protein 86 187 IPR004864 -
Bva09g00428 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 5 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00428 Bva-Chr9 2268168 2269074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00428 9 188 EF-hand Containing Proteins AT5G21130 24.084 7.57e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00428 - - pvu:PHAVU_005G120900g 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00428 09 2268168 2269074 Bva07g02214 07 18487505 18488296 BWGD
Bva09g00428 09 2268168 2269074 Bva09g00428 09 2268168 2269074 ECH