Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00424 ATGTTGGTGAGTAAagatcaaaattcaaaacccGTTGTGATTCGGGAAGTATGGGCTTCTAATCTAGAATCTGAATTCGAGCTCATCGGGGAAGTCATTGATCGCTACCCCTTTATTTCCATGGATACTGAATTCCCTGGTGTCATATACCGCCCCCGCACGGACCCCAGTAAGCCCTTCAACCTCCGTCAACTTAGCCCCTCCGATCATTACCGCCTCTTGAAGTCCAACGTCGACGCCTTGAACCTCATCCAAGTGGGTCTTACCCTCTCCGACGCCGACGGCAACCTCCCGGACCTCGGATCTGGAAACCGATTCATCTGGGAATTCAATTTCAGGGATTTCGATGTGGAGCGTGATGCTTACGCCCCGGATTCCATCGAATTGCTCATGCGCCAAGGAATTGACTTCCGTCGGAACGCCGCGGACGGCGTCAACTCCGGCCGGTTCGCCGAGCTTATGATGTCGTCGGGACTCGTCTGTAACGAGTCGGTGAGTTGGGTAACGTTTCACAGCGCGTATGACTTCGGGTACCTTGTCAAGATCCTTACCCGACGGAGCTTGCCTAACGGGTTGGAGGAATTCCTGAGGATGTTGAGGGTATTTTTCGGGAACAATGTTTATGACGTCAAGCATATGATGCGGTTCTGTAACAGCCTTTACGGCGGTTTGGACCGGGTAGCCAGGACACTCAACGTGGACCGGACGGTCGGTAAATGCCACCAAGCCGGGTCAGACAGCTTGCTGACCTGGCATGCCTTTCAGAAAATCAGGGATATTTACTTTGTAAAGGATGGGCCGGAAAAACATGCCGGTGTATTGTATGGACTAGAGGTTTTCTGtta 845 0.5112 MLVSKDQNSKPVVIREVWASNLESEFELIGEVIDRYPFISMDTEFPGVIYRPRTDPSKPFNLRQLSPSDHYRLLKSNVDALNLIQVGLTLSDADGNLPDLGSGNRFIWEFNFRDFDVERDAYAPDSIELLMRQGIDFRRNAADGVNSGRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPNGLEEFLRMLRVFFGNNVYDVKHMMRFCNSLYGGLDRVARTLNVDRTVGKCHQAGSDSLLTWHAFQKIRDIYFVKDGPEKHAGVLYGLEVFC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00424 281 SUPERFAMILY Ribonuclease H-like 13 277 IPR012337 -
Bva09g00424 281 Gene3D - 2 280 IPR036397 GO:0003676
Bva09g00424 281 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 8 280 IPR039637 GO:0004535|GO:0030014
Bva09g00424 281 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 8 280 - -
Bva09g00424 281 Pfam CAF1 family ribonuclease 17 145 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00424 Bva-Chr9 2252303 2253294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00424 K12581 - qsu:112026170 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00424 09 2252303 2253294 Bva07g02217 07 18503465 18504501 BWGD
Bva09g00424 09 2252303 2253294 Bva09g00424 09 2252303 2253294 ECH