Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00399 ATGACTGAGGTCCTCCACTCCCCTTCCCATTTTTCTTCGTCTCCAAGGAGAagctcttcctcttcttccttatCCTGTGCGCCTTTATCCTCACTATCGTGCTCACCCCCTTCCGGTGATGGCATTCTCCTTATTAGTGACCAAGAATCTCTGACACCCTCTTCCTCTCTAGCCGAGGACGTTTGTTCTACGGCGACCAATTGTGACACAGAGGAGTTCAAGGACAGGGAGAAGCAGAGGACTGAACAACTTTCTATTTTGGCGCTTCTCGTTACCCTTTTCAGGAAATCCTTAATTGTTTGTAAGAGTGACAGGAGGGAGCTTTGTGCCATGGATATTGGGTGGCCCACTAATGTGCGCCATGTTGCGCATGTCACATTTGATAAATTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTCGAACCTGAAGTACCCAGAAGGCCTCCCAGTGCTAGTACAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATATGACACTAGAGGGAATAGTGTGCCAACAATTCTGTTACTAATGCAAAGCCGCTTGTATGCTCAACGAGGGTTGCAGGCGGAGGGAATTTTCAGAATTAATGCGGAAAATAGTCAAGAGGAATCTGTTAGGGACCAATTAAACAGGGGATTGGTCCCGGAAGACATTGATGTACATTGTTTGGCAGGACTTATCAAGGCATGGTTTAGGGAACTGCCCACAGGCGTTCTGGATTCTTTATCACCTGAGCAGGTAATGTTGTGCCAGACTGAGGAAGAGTGTGCTGAGCTGGCAAGGCGTCTTCCTCCCACTGAAGCCGCCCTCTTAGACTGGGCCATCAATCTGATGGCTGATGTTGTCCAACATGAACACCTGAACAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAATATGACTCGGATGGCAGACCCTTTGACTGCATTGATGTACGCAGTTCAATTGATGAACTTCTTGAAGATGCTTATACTAAGGACACTGCGGGAGAGAAAGGATTCTGTGATAGAATCTTCCCCGGGATTTCATTTCGAGCCTTTTGATGAGAATGGGCACCATAGTACTTTGCAGTGTTGCCAGGAGGATACCACgcgagaaaatgaagagactGAGGAAATGTTTGTCTTGGAGAAAACTGTCTTAGAATGTTTCGCTGACTCTGTTCAAGATAACAACTTAACCGGAGGAGAATCTAGCAGTTTGATTACTTCTTCTGAGAGTCCAGTTTGCGATGAAGAGTTGTACTGTGAGTTTCCACCTAAAGGAAACGTTGGGAAGAGTAAGACTGGCCAATCAAGTAATCCAAATTCTAGAAAGGGGGCCAGAAAAGACAGAGGCCAGCAACCCACAAGCCAGGGAAGAGTTCCTGCTGAGAAAGCCAGGGGAATTAGCAATCTGAGCCGTATAGATTCAAGATCGGAGCGGATAGAAGCCTGGCGGTA 1463 0.4545 MTEVLHSPSHFSSSPRRSSSSSSLSCAPLSSLSCSPPSGDGILLISDQESLTPSSSLAEDVCSTATNCDTEEFKDREKQRTEQLSILALLVTLFRKSLIVCKSDRRELCAMDIGWPTNVRHVAHVTFDKFNGFLGLPVEFEPEVPRRPPSASTTVFGVSTESMQLSYDTRGNSVPTILLLMQSRLYAQRGLQAEGIFRINAENSQEESVRDQLNRGLVPEDIDVHCLAGLIKAWFRELPTGVLDSLSPEQVMLCQTEEECAELARRLPPTEAALLDWAINLMADVVQHEHLNKMNARNIAMVFAPNMTRMADPLTALMYAVQLMNFLKMLILRTLRERKDSVIESSPGFHFEPFDENGHHSTLQCCQEDTTRENEETEEMFVLEKTVLECFADSVQDNNLTGGESSSLITSSESPVCDEELYCEFPPKGNVGKSKTGQSSNPNSRKGARKDRGQQPTSQGRVPAEKARGISNLSRIDSRSERIEAWR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00399 487 SUPERFAMILY GTPase activation domain, GAP 152 332 IPR008936 GO:0007165
Bva09g00399 487 Gene3D CRIB domain 110 143 IPR036936 -
Bva09g00399 487 SMART PBD_5 113 147 IPR000095 -
Bva09g00399 487 MobiDBLite consensus disorder prediction 428 487 - -
Bva09g00399 487 Gene3D Rho GTPase activation protein 146 342 IPR008936 GO:0007165
Bva09g00399 487 CDD CRIB 111 151 - -
Bva09g00399 487 CDD RhoGAP 175 331 - -
Bva09g00399 487 SMART RhoGAP_3 172 335 IPR000198 GO:0007165
Bva09g00399 487 ProSiteProfiles Rho GTPase-activating proteins domain profile. 158 343 IPR000198 GO:0007165
Bva09g00399 487 Pfam P21-Rho-binding domain 112 138 IPR000095 -
Bva09g00399 487 PANTHER MKIAA1688 PROTEIN 1 487 IPR044785 GO:0005096
Bva09g00399 487 Pfam RhoGAP domain 175 309 IPR000198 GO:0007165
Bva09g00399 487 ProSiteProfiles CRIB domain profile. 113 126 IPR000095 -
Bva09g00399 487 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 487 - -
Bva09g00399 487 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00399 Bva-Chr9 2149217 2152835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00399 - K20642 gmx:100775644 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00399 09 2149217 2152835 Bva07g02246 07 18613661 18616211 BWGD