Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00393 ATGGCTAACAGCAGATCAGCTATGATAagctcttttttcttcttcaaagtGATTTTGCTGCTTCTTACCATTTCTGATTCGTTTGTTCAAATACGTGGCCTCGGGGTTGGAATCAACTATGGCCAGATAGCCAATAATCTACCTTCTCCTTCTCGTGTGGCTGTTCTTATAAATTCTCTTAACGTGAGCAGAGTTAAGCTCTATGACGCTGATCCGAATGTTTTAGCTGCTTTTTCCAATTCCAATGTTGAATTTGTTATAGGACTTGGAAGTGAGTATCTGCAGAATATGACAGACCCATTTAAAGCTCAGGCTTGGATTCAACAACGTGTTCAACCTTACATCTCACAAACTAAAATCACCAGCATCACTGTTGGAAATGAAGTTTTCAATAGCAATGATACCCAGCTAATGCAAAACCTTCTCCCAGCAATGAAAACAGTTTATGGTGCCCTTGTTAATCTTGGTCTAAATCAACAAGTTACTGTCACTAGTGCTCATTCTTTCAACATTTTAGGCAATTCTTTCCCTCCTTCTTCTGGGTCTTTTAGGCAAGATCTGGTGCAATATATCCAACCCCTTTTGAATTTCCATGCTGAAATCAAATCACCATTTCTCATAAATGCATATCCTTTTTTTGCATACATGTATAGCCCAAATGAGATTCCATTGAACTATGTCCTTTTTCAGCCAAATTCAGGGATGATTGACCCAAACACAAATTTGCACTATGATAATATGTTGTACGCTCAGATTGATGCTGTTTATGCTGCCATCAAACAGCTTGGGCATACCGATATCGAGGTTAGAATTTCAGAGACTGGGTGGCCATCTAAGGGTGACCCTGATGAAATTGGAGCTTCACCAGAGAATGCAAACCTATATAATGGCAATTTACTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCAAAACCATCAGTTCCAGTAGACATTTATGTCTTTGCTCTTTTTAATGAGAATTTGAAGCCTGATCCAGCTTCAGAGAGAAACTACGGCCTCTACTATCCTGATGGTTCTCCAGTTTACAACCTTGGATTACAAGGTTATCTCCCAGATATGGTCATAGAATCCAAGTCTAATGCATTGTCTGTCGGTTTTATCGTCTATGTTGTTTCATGGTTAATTTGTTCTTGGGAGATTTCAAGGTTGTG 1175 0.3889 MANSRSAMISSFFFFKVILLLLTISDSFVQIRGLGVGINYGQIANNLPSPSRVAVLINSLNVSRVKLYDADPNVLAAFSNSNVEFVIGLGSEYLQNMTDPFKAQAWIQQRVQPYISQTKITSITVGNEVFNSNDTQLMQNLLPAMKTVYGALVNLGLNQQVTVTSAHSFNILGNSFPPSSGSFRQDLVQYIQPLLNFHAEIKSPFLINAYPFFAYMYSPNEIPLNYVLFQPNSGMIDPNTNLHYDNMLYAQIDAVYAAIKQLGHTDIEVRISETGWPSKGDPDEIGASPENANLYNGNLLKRIEQKQGTPAKPSVPVDIYVFALFNENLKPDPASERNYGLYYPDGSPVYNLGLQGYLPDMVIESKSNALSVGFIVYVVSWLICSWEISRL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00393 391 Gene3D Glycosidases 35 358 - -
Bva09g00393 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 370 IPR044965 GO:0004553|GO:0005975
Bva09g00393 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 13 370 - -
Bva09g00393 391 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
Bva09g00393 391 Pfam Glycosyl hydrolases family 17 36 352 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00393 Bva-Chr9 2119841 2123387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00393 86 388 Glycoside Hydrolase AT2G27500 70.724 7.45e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00393 - - gmx:100786020 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00393 09 2119841 2123387 Bva07g02251 07 18639982 18642252 BWGD
Bva09g00393 09 2119841 2123387 Bva09g00393 09 2119841 2123387 ECH