Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00326 ATGGCGGCCACTTTTCCCGCTCGGATTCTCATCGCGATCGCACTGTTGTCGGCGGAGGCGCTTTCTCTTGGCCCGTTGACTCTGACGCTGGAAAGAGCTTTTCCGACGAATCACGGAGTGGAGTTGAGTCAGCTCAGAGCTCGGGACAAGATAAGGCATGAAAGAATGTTGCAATCTTTGAACGGTGTGGTTGATTTCCCAGTTCTTGGGACCTTCGATCCCCTCGAAGCCGGGCTTTACTTTACGAAGGTGAAGCTAGGTTCTCCTCCCAGAGAGTTTAGTGTGCAGATTGACACTGGCAGTGACGTTCTCTGGGTTAGTTGTGGTTCATGCACTGGTTGTCCCCTGACAAGTGGGCTCGAAATTCAGCTCAATTTTTTTGACCCGGGGAGTTCATCAACATCTTCATTGGTCTCTTGTTCTGACCGAAGATGCAGTAGTGGAGTTCTATCATCAGATACCAGCTGCTCCACTGAGAACAATCTGTGCACGTACAAATTCCAGTATGGAGATGGTAGTGGGACATCAGGCTATTACATATCAGACTTGATGCATTTTGACGCTATTTCAGAAGGATCTGTGATTACAAATTCTTCAGCGCCGATAGTTTTTGGGTGCAGCAACCTGCAGACTGGGGACTTGACAAAGTCAACAAGAGCAGTTGATGGAATATTTGGATTTGGGCAACAGAGCCTGTCTGTCATCTCCCAGCTCTCCTTACAAGGAATAGCGCCGAGAGTGTTCTCCCATTGCCTTAATGGAGATAGTGGCGGGGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAATATAGTTTATAGTCCACTTGTTCCATCACAGCCTCATTACAATCTAAATCTGCTGAGCATCTCTGTTAACGGGCAAATGTTGCCCATTGATGAATCAGTTTTTGAAACATCAACTAACCAAGGTACCATTATTGATTCTGGGACAACTTTGGCATACCTTGCAGAAGGGGCATACGATCCCTTTGTCAGTGCAATAACAGCAGCAGTTTCACAATCTGTGCGCGCTGTCCTTACTAGGGGAAATGAGTGTTACTTAGTCACCTCCAGCATATCTGATATTTTCCCCGAAGTAAGTTTTAACTTTGCTGGTGGTGCAAATCTGGTTTTAAGACCAGAGGACTATCTTATTAAGCAGAGTTCCATTGGCGGTGCAGCTGTGTGGTGTATAGGTTTTCAGAAAATTCAGGGTCAAGAGATAACAATTTTAGGAGACCTTGTACTTAAGGACaagatttttgtttatgatcTGGCTGGTCAACGGATTGGATGGGCTTACTATGACTGTTCGACGTCAGTTAATGTTTCTGCAACAAGTGGGATGCGCAGAAGTGAATTTGTGAATGCAGGAGAGCTAAGTGGGAGCACTTCTCTAAGTGATGGTCCTTTCAAGTTGATAACAGAGGGAGTCTTTGCTTTAACCCTCATCAGTAGCCTTGTGTTTTTGTA 1475 0.4542 MAATFPARILIAIALLSAEALSLGPLTLTLERAFPTNHGVELSQLRARDKIRHERMLQSLNGVVDFPVLGTFDPLEAGLYFTKVKLGSPPREFSVQIDTGSDVLWVSCGSCTGCPLTSGLEIQLNFFDPGSSSTSSLVSCSDRRCSSGVLSSDTSCSTENNLCTYKFQYGDGSGTSGYYISDLMHFDAISEGSVITNSSAPIVFGCSNLQTGDLTKSTRAVDGIFGFGQQSLSVISQLSLQGIAPRVFSHCLNGDSGGGILVLGEIVEPNIVYSPLVPSQPHYNLNLLSISVNGQMLPIDESVFETSTNQGTIIDSGTTLAYLAEGAYDPFVSAITAAVSQSVRAVLTRGNECYLVTSSISDIFPEVSFNFAGGANLVLRPEDYLIKQSSIGGAAVWCIGFQKIQGQEITILGDLVLKDKIFVYDLAGQRIGWAYYDCSTSVNVSATSGMRRSEFVNAGELSGSTSLSDGPFKLITEGVFALTLISSLVFL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00326 491 PRINTS Pepsin (A1) aspartic protease family signature 86 106 IPR001461 GO:0004190|GO:0006508
Bva09g00326 491 PRINTS Pepsin (A1) aspartic protease family signature 410 425 IPR001461 GO:0004190|GO:0006508
Bva09g00326 491 PRINTS Pepsin (A1) aspartic protease family signature 312 323 IPR001461 GO:0004190|GO:0006508
Bva09g00326 491 SUPERFAMILY Acid proteases 77 442 IPR021109 -
Bva09g00326 491 Pfam Xylanase inhibitor N-terminal 80 264 IPR032861 -
Bva09g00326 491 Gene3D Acid Proteases 63 265 IPR021109 -
Bva09g00326 491 Gene3D Acid Proteases 266 445 IPR021109 -
Bva09g00326 491 PANTHER ASPARTYL PROTEASES 21 455 IPR001461 GO:0004190|GO:0006508
Bva09g00326 491 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 21 455 - -
Bva09g00326 491 Pfam Xylanase inhibitor C-terminal 282 433 IPR032799 -
Bva09g00326 491 CDD pepsin_A_like_plant 80 438 IPR034161 -
Bva09g00326 491 ProSiteProfiles Peptidase family A1 domain profile. 80 434 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00326 Bva-Chr9 1685418 1688621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00326 54 439 Miscellaneous Gene Families AT1G44130 25.935 2.43e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00326 - K00924 gmx:100791299 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00326 09 1685418 1688621 Bva07g02318 07 19021070 19025219 BWGD
Bva09g00326 09 1685418 1688621 Bva09g00326 09 1685418 1688621 ECH