Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00287 ATGGGCGAGAAGAAGACTGAGAAAAACGATGCtggaaagaaggaagagaagaacaagaagaacgATGGaggaaagaaggaagagagtCCCAATACTGTGGTCTTGAAGGTCGACATGCATTGCGATGGTTGTGCTTCCAAAATCATCAAATCTGCCCGCCGCTTTGAAGCGCACATTGTTGTTTATCCGTGCGAAGGCGTGGAAAGTGTGAAGAGCGATGCCAACAAGTTGACGGTGGTCGGAAAATTGGACCCCTCGAAACTCCGAGACAAGCTGGCATTGAAGACCAAGAAGAAGGTCGAGGTCATCTCTCCGCAGCCTAAGAAAGAGAGCAAGGAATCCAAAGCCGAGAACAACAAGAAGTCCGATGACAAGTCAAAGAAGAAAGCCGACGGCGATGAGAAAAAACCCAAAGAGCCTCCGGTGACGACGGCGGTTCTGAAGGTGGCATTGCACTGCCAGGGATGCATCGAGAAGATTTCCAAGACAGTAAGACAGACCAAAGGTGTCCATGACATGTCAATGGACAAGGAGAAGGAAACTATCACGGTGAAGGGAACGATGGACGCGAAAGCTTTGGCGGAGAATCTCCAGCAGAGGCTCAAGAGAAAGGTGGAGATTGTCCCTcccaagaaagagaaggacaaagagaaagagaacaaagAAGGTGGAGCTGAGAAAGAGGGAGGCGGCAATAGCGGtggtaaaaagaagaaaggtggTGGTGCAGGCGGCGGTGGGGGTGGAGATAATAATGAGAAGGGAGGTGTCGAGGGAGGAAAAATGGATAAGATGGAGTACTATCCGGTACCCTGGTTTGGACATGGGTACGGTCCAGTTTACATGGAACAAGTGCATGCACCGCAAATGTTCAGTGATGAGAACCCGAATGCTTGTTCTGTTATGTG 908 0.446 MGEKKTEKNDAGKKEEKNKKNDGGKKEESPNTVVLKVDMHCDGCASKIIKSARRFEAHIVVYPCEGVESVKSDANKLTVVGKLDPSKLRDKLALKTKKKVEVISPQPKKESKESKAENNKKSDDKSKKKADGDEKKPKEPPVTTAVLKVALHCQGCIEKISKTVRQTKGVHDMSMDKEKETITVKGTMDAKALAENLQQRLKRKVEIVPPKKEKDKEKENKEGGAEKEGGGNSGGKKKKGGGAGGGGGGDNNEKGGVEGGKMDKMEYYPVPWFGHGYGPVYMEQVHAPQMFSDENPNACSVM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00287 302 Gene3D - 142 215 - -
Bva09g00287 302 SUPERFAMILY HMA, heavy metal-associated domain 142 198 IPR036163 GO:0046872
Bva09g00287 302 Gene3D - 26 111 - -
Bva09g00287 302 MobiDBLite consensus disorder prediction 201 234 - -
Bva09g00287 302 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 13 302 IPR044594 GO:0046872
Bva09g00287 302 MobiDBLite consensus disorder prediction 98 143 - -
Bva09g00287 302 CDD HMA 146 195 IPR006121 GO:0046872
Bva09g00287 302 MobiDBLite consensus disorder prediction 98 141 - -
Bva09g00287 302 SUPERFAMILY HMA, heavy metal-associated domain 29 103 IPR036163 GO:0046872
Bva09g00287 302 MobiDBLite consensus disorder prediction 1 32 - -
Bva09g00287 302 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 13 302 - -
Bva09g00287 302 MobiDBLite consensus disorder prediction 201 262 - -
Bva09g00287 302 Pfam Heavy-metal-associated domain 147 199 IPR006121 GO:0046872
Bva09g00287 302 CDD HMA 34 101 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00287 Bva-Chr9 1497509 1499124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00287 - - fve:101297986 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00287 09 1497509 1499124 Bva07g02355 07 19218833 19221315 BWGD