Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00254 ATGTTTTGGAAGCTCACGGCTTTGTCTGCGTCCTCCCCTGTGGAGGCAATACTGGATAAGGAGAATTTCACGCTGGAAGAGCTTCTAGATGAAGAGGAAGTAATCCAGGAATGCAAGGCCTTGAACAGTCGTCTCATTAACTTCCTGAGGGATAGAGCCCAGGTTGAGCAATTACTGTGTTACATTATTGAAGAACCGCCAGAAGATTCTGAAAGCAAACGAGCCTTCAAgTTTCCATTCATTGCCAGTGAGATTTTTACATGTGAAATTGATGTTATTTTGAAGACTTTGGTGGAGGAAGAGGAGCTGATGAACTTATTATTCTCCTTCTTGGAGCCTGACCGTTCTCATAGTACCTTGCTGGCTGGGTATTTTAGCAAGGTTGTTGTGTGCCTAATGGTTCGGAAGACAGTGGCACTTATGACTTATGTTCAAGCCCATCAGAATGTTTTTCGCCAATTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTGCTGATGACCATGTGTATCCCAATTTTATAGATGTAACACAATGGTTGGCTGAGAGCAATCTGCTGGAGATGATCGTTGATAAACTAAGTCCATCTAGTCCTCCTGAGGTTCATGCCAATGTAGCCGAGACGCTATGCACAATAACACGAAATGCCTCATCTACTCTTGCTATCAAACTTTCAAGTCCAAGTTTTGTTGcaagaattttgaattatgcATTGGAAGATTCACAATCAAAGTCTAGCCTTGTCCACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCAAAACGATCTGCGGTTCCTTCTCCTCTCTTCCATTCTTTCCGAAGCCAACCCATATATGAGGCTCCAATTCTCATCAATCCAGATACTATTGGTGCAATGCTCCCAAAACTTGGTGACATGCTTATGCTTCTGAATGTGTCATCTGATGAAAAGGTGTTGCCAACAACATATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTAAAGattGTGGAGTTCATTTCAGTGCTTTTAAGAACTAGAAATGAAGTGGCAGAAAAAGAATTGGTTGGCTCAGGAATCATTGAACGAGTGATTGATCTTTTCTTCCAGTATCCATACAATAGCTCATTGCACCATCACGTAGAAAGTATCATATTCTCATGTTTGGAGAGCAAAAGTGATGCAATTGTTGATCATATACTTCGGGAGTGCAATTTAATTGGAAAAGTTCTCCAAGTTGATAAACATCCTATTCTTTCTGGTGACAGCAGTCAGCCGACAATTCCTGCTGCTGGAAAACGGGCACCACGGGTAGGAAACATTGGACATATTACTCGGATTGCTAACAAGTTGGTCAACCTGGAAAATAACCAAGGTTGTATTCAGGCATATCTTCAGGAAAATAGTGAGTGGAATGGGTGGCGAGCTACAATTCTGCAGGAGCGTAATGTAGTTGAGAATGTTCAGCACTGGGCTTGTGGACGACCAACTGCATTACAAGATAGGATGAGGGATAGTGACGATGACGACCTTCATGACAGAGATTATGATGTAGCAGCTTTAGCAAATAATTTGAGCCAGGcgtttagatataaaatttatgggaATGAGGATAATGAAGAGGACCATGGAGGTATTAATCGAGATGATGAGGATGTCTACTTTGACGATGATTCTGCTGAAGTAGTCATATCTTCCCTAAGACTCGGTGATGATCAAGGGAGTAGTCTGTTTACGAAGTCCAACTGGTTTGCATTCGAAGATGACAGAACCGGTAATGCACCTGGGGGTACATCATCCTCAGAGATGATGGATGAGATTAACTTGAATGGAGCTACAACTGGTGGTAACAGCAGTAGTGATGATGAGGTAGTGGttggagaagatgaagaattgGCAGAAAGCAAAGACACTGTAAATAGTACATCTAGCTCAAGCACAAACCTCTCCAGTGGATTAACTACTGATAGTAATTCCATAAATGGCGGTGCTCTGAACTTCGAAAGTGAGATGGCAAGCGCTTCACATGATATGGGATTTTTCAGGTTTGAGACGCCAGACAATGAAGACTTGTTCGGGGATAGGCCGTTACCTGACTGGGTGGGATGGGGTGAACCATCAGATATGCAAGTTACTGGTTCAAGTATGAATCCCTTCGTGGATCATGATGAGTCGGATAGCAATCTTTCCACCAAAGTTCAAATAGGCAATCCTAATGCTAGTCCACCATCAAATGGGGAATCAAAACCTGCAAATGGGTCGCCAACCGCTAGAAATTCTAGCGAGGGGATGGGTGATGGAATTCAAAGATCTGTAGCAGTGCCATCTTTATTTGAAGAGGATGTTGAATTTGTTGGTGTGGAATTAGAGGGCACTGAGAAGGCAATGGAACAGGCTTTGAAAGAAGGAATAGTTGGGGAAGCAGGACCGTTGAAAAGAAACATGGCGACCAAAGTGCCAGAAAAGGAGAATTCTGAGGAGGGTGGACCTGGAATGAAGGAATTCAACGATGCCAATTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTGGAATA 2564 0.4204 MFWKLTALSASSPVEAILDKENFTLEELLDEEEVIQECKALNSRLINFLRDRAQVEQLLCYIIEEPPEDSESKRAFKFPFIASEIFTCEIDVILKTLVEEEELMNLLFSFLEPDRSHSTLLAGYFSKVVVCLMVRKTVALMTYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVTQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTITRNASSTLAIKLSSPSFVARILNYALEDSQSKSSLVHSLSVCISLLDPKRSAVPSPLFHSFRSQPIYEAPILINPDTIGAMLPKLGDMLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFISVLLRTRNEVAEKELVGSGIIERVIDLFFQYPYNSSLHHHVESIIFSCLESKSDAIVDHILRECNLIGKVLQVDKHPILSGDSSQPTIPAAGKRAPRVGNIGHITRIANKLVNLENNQGCIQAYLQENSEWNGWRATILQERNVVENVQHWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNEDNEEDHGGINRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTKSNWFAFEDDRTGNAPGGTSSSEMMDEINLNGATTGGNSSSDDEVVVGEDEELAESKDTVNSTSSSSTNLSSGLTTDSNSINGGALNFESEMASASHDMGFFRFETPDNEDLFGDRPLPDWVGWGEPSDMQVTGSSMNPFVDHDESDSNLSTKVQIGNPNASPPSNGESKPANGSPTARNSSEGMGDGIQRSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMATKVPEKENSEEGGPGMKEFNDANYWRVDQEVAVLE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00254 854 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 3-LIKE ISOFORM X1 1 852 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 814 840 - -
Bva09g00254 854 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 852 IPR007587 GO:0019903|GO:0043666
Bva09g00254 854 Coils Coil 850 854 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 819 833 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 711 769 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 640 664 - -
Bva09g00254 854 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Bva09g00254 854 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Bva09g00254 854 MobiDBLite consensus disorder prediction 706 775 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 596 624 - -
Bva09g00254 854 MobiDBLite consensus disorder prediction 591 664 - -
Bva09g00254 854 SUPERFAMILY ARM repeat 181 415 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00254 Bva-Chr9 1285370 1293724 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00254 K15501 - gmx:100805409 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00254 09 1285370 1293724 Bva07g02394 07 19439875 19447801 BWGD
Bva09g00254 09 1285370 1293724 Bva09g00254 09 1285370 1293724 ECH