Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00249 ATGCCCTCCGATACGAGCTCTTCCATTTCCGGCGATGACCACTCCGACCAATTCATCGAAGatcaattggcttcggtcactttggcCGAGTATAATGACGAACCATCTGGTTCGGCCAATCGACAAGCAAACGGCGTCGTTGGTGGATCTGTTAATCAGAGCGCTCAACTCGAAATTGAGGAACGGGTACAGAGCAGTTCAGTAGAAGCGGAAGAGGTTGGACAAGTTAGGGGGCCTGCAGAACATGCTGTTGTGTGGGGGAGAACCGTTTCGGAGCTCGAAATGGATGGTTCTTCCAGCCCTGGTAGTAGTGGCTATGCTGGTGAAAGGGGCAGTAGCAGTGCGACTACTGGGTCTGCGATTGACGAGGTTGTTCAACAGGAAATAGAAGAAGCCAGAAATGATGACACTGTGGAAGGAATCTCCGATTCCCAGATGTCGTGGCCTCCGGGGAAACAACATGTGGATGAGGACGATGCTTCCATATCTtggaggaaaaggaagaagcatttttttattctgaGTCATTCTGGCAAACCAATATATTCTAGATATGGAGATGAACACAAGCTTGCGGGATTTTCAGCTACTTTGCAAGCAATCATTTCCTTTGTGGAAAACGGGGGTGACCGTGTAAAATTGGTGAGGGCCGGAAAGCATAAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTTTGCATTAGCTGCACAGAAGAACCTTATGAGTCATTAAGTGGACAGTTGGAGCTTATTTATGGGCAGATGATTGTTATATTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCTAAGTTTGATATGACACCTCTACTTGGAGGAACAGATGTTGTCTTCTCTTCTCTGATCCGTTCTTTCAAtagGAATCCTGCTACATTTCTTCATGCCTATACTTGTCTTCCCCTTTCGTATGCGACAAGGCAAGCTGCAGGTGCTATCTTGCAAGATGTTGCAGATTCAGGTGTTCTGTTTGCAATACTAATGTGCAGACACAAGGTGATCAGTCTTGTGGGTGCTCAGAAAGCTTCTCTACATCCGGATGATATGCTCCTGCTAGCCAATTTTATTATGTCATCAGAATCCTTTAGGACATCAGAATCATTCTCTCCAGTTTGCTTGCCAAGATATAATCCTTTGGCATTTTTGTATGCTTATATTCATTACTTTGATAATGACACATACTTGATTTTGCTGACCACAAGCTCGGATGCCTTCTATCATCTCAAGGATTGCAGGATTCATATCGAAATGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGTGGGATGCACGTTGAGGATCTGCCTGTTGACCCTTTCCCCCGTTCTGGATCATCTCCTCATTTGGGCCAGCACAGACTTCCAACAGATTCTACTGAAAGATTGAGGGAACCTTATCTTGGCATTGGTGGTCCTGCTGGGCTGTGGCATTTCATATACCGCAGTATCTATCTGGATCAATATGTTTCTTCAGAGTTATCATCTCCAATTAACAGTCCTCAGCAGCAGAAAAGGCTGTATAGAGCTTACCAGAAAATTTATGCGTCCATGCATGATAAAGCAATTGGGCCACATAAAACACAATTCAGAAGAGATGAAAACTatgTTCTTCTCTGTTGGGTGACGCAGGATTTTGAGCTCTATGCTGCCTTTGATCCCCTTGCAGACAAGGCTTTGGCGATAAAGACTTGCAACCGCGTTTGCCAATGGGTAAAAGACTTcgaaaatgaaatattcttACTAGGAGCTAGCCCATTCTCTTGGTG 1811 0.4263 MPSDTSSSISGDDHSDQFIEDQLASVTLAEYNDEPSGSANRQANGVVGGSVNQSAQLEIEERVQSSSVEAEEVGQVRGPAEHAVVWGRTVSELEMDGSSSPGSSGYAGERGSSSATTGSAIDEVVQQEIEEARNDDTVEGISDSQMSWPPGKQHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHKVVFLVKGPIYLVCISCTEEPYESLSGQLELIYGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDVVFSSLIRSFNRNPATFLHAYTCLPLSYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFIMSSESFRTSESFSPVCLPRYNPLAFLYAYIHYFDNDTYLILLTTSSDAFYHLKDCRIHIEMVLLKSNVLSEVQRSLLDGGMHVEDLPVDPFPRSGSSPHLGQHRLPTDSTERLREPYLGIGGPAGLWHFIYRSIYLDQYVSSELSSPINSPQQQKRLYRAYQKIYASMHDKAIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDFENEIFLLGASPFSW 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00249 603 MobiDBLite consensus disorder prediction 1 78 - -
Bva09g00249 603 MobiDBLite consensus disorder prediction 93 118 - -
Bva09g00249 603 Pfam First Longin domain of FUZ, MON1 and HPS1 169 290 IPR043972 GO:0016192
Bva09g00249 603 MobiDBLite consensus disorder prediction 29 71 - -
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 187 207 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 221 235 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 169 186 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 402 428 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 568 581 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 284 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 301 322 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 552 566 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 374 397 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 581 601 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 325 338 IPR004353 GO:0006623
Bva09g00249 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 349 365 IPR004353 GO:0006623
Bva09g00249 603 PANTHER SAND PROTEIN-RELATED 90 603 IPR004353 GO:0006623
Bva09g00249 603 Pfam Second Longin domain of FUZ, MON1 and HPS1 330 420 IPR043971 GO:0016192
Bva09g00249 603 Pfam Third Longin domain of FUZ, MON1 and HPS1 489 588 IPR043970 GO:0016192
Bva09g00249 603 PANTHER BNAC04G15860D PROTEIN 90 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00249 Bva-Chr9 1256304 1262109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00249 K20195 - zju:107411372 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00249 09 1256304 1262109 Bva07g02399 07 19475648 19481183 BWGD
Bva09g00249 09 1256304 1262109 Bva09g00249 09 1256304 1262109 ECH