Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00242 ATGCTACGTCGACTCGTCCTTGTCCTTTCCCTTACTGgtcttctccttctctcttctttctctttcactttATCCAAGGCCACTGACAATGACGACGACGAGGATCTCAGCTTTCTCGAAGAAGCTGATGACAGCTCTACTTCACCCCGCGACCACCAACACTACCCAGATCCCGACCAGTTCGACGAAGACGATGATCTCGAAGACTTCTCCGGATTCGATGACTTGCCAGCAGACACGGATGATTCTCACAAAGAGCCTGAATTTGATGAGAAAGACGTCGTCGTCTTGAAGGAGAGGAATTTCACCACCGTCATCGAGAACAATCGCTTTGTAATGGTTGAATTCTATGCGCCCTGGTGTGGCCATTGCCAGGCTTTGGCACCAGAGTACGCTGCGGCCGCCACCGAGTTGAAGGGCGAGAATGTGGTTTTGGCGAAGGTGGATGCCACCGAAGAGAATGAATTATCCCATGAGTACGATGTTCAGGGATTCCCGACTGTCTACTTTTTCATCGATGGGGTTCATAAGCCTTATACTGGTCAGAGGACCAAAGATGCTATAGTGACCTggattaagaagaaaataggaCCTGGCATAAACAACATAACTACATTGGATGATGCTGAACGTATTTTGACCTCTGAAAAGAAGGTTGTGTTGGGTTTCCTCAACTCTCTGGCGGGTCCTGAAAGTGAGGAGTTAGCTGCTGCTTCAAGACTTGAGGATGAtgtcaatttttatcaaactgTGAATCCTGATGTGGCAAAGCTTTTCCATATTGACGCAAATGCTAAACGCCCTGCTTTGGTCCTGCTCAAGAGAGAGGAGGAGAAATTAAACCTTTTTGATGGCCAGTTTGTAAAATCTGCAATAGCTGACTTTGTAAGCTCCAACAAGCTTCCTTTGGTTACCACTTTTACAAGGGAAAGTGCCCCATCAATTTTTGAAAGTTCAATCAAGAAACAGCTCCTGCTATTTGTGACTTCTAATGATTCAGGGAAGTTCGTGCCGATATTTCAAGAAGCAGCAAAATCTTTCAAAGGAAAGCTTATCTTTGTACATGTCGAAATGGATAATGAAGATGTTGGAAAGCCTGTATCAGATTATTTCGGTATCTCTGGAAATGATCCCGctGTACTTGCATACACTGGAAATGATGatggaaaaaaatttgtgcTTGATGGAGAGATCACTGTCGACAAAATCAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACTTTTCTACAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAGTGGTCGGGAATAACTTTGACGAAATTGTCTTGGATGAGTCAAAGGATGTGCTTCTTGAGATTCATGCACCCTGGTGTGGCCATTGCCAAGCATTGGAACCAACATACAACAAGCTTGCCAAACATTTGCGTGGCATTGATTCTATTGTAATAGCCAAGATGGATGGAACAACAAATGAGCATCCAAGGGCTAAGGCTGATGGGTTCCctactcttctcttcttcccaGCAGGAAACAAGAGTTTTGACCCTATTACAGTTGACACAGATCGTACAGTGGTGGCCTTATACAAGTTCCTGAAGAAAAATGCGTCAATCCCATTTAAGCTACAGAAACCAGAGTCAACTCCTAAAGATGGGAGTTTTGATGCCAAGGAAAGGCAGAGCGGCAGTAGCAAGGAAAGTGGGGGCAGCAGTAGCGAAGTGAAGGATGAATTATG 1742 0.4214 MLRRLVLVLSLTGLLLLSSFSFTLSKATDNDDDEDLSFLEEADDSSTSPRDHQHYPDPDQFDEDDDLEDFSGFDDLPADTDDSHKEPEFDEKDVVVLKERNFTTVIENNRFVMVEFYAPWCGHCQALAPEYAAAATELKGENVVLAKVDATEENELSHEYDVQGFPTVYFFIDGVHKPYTGQRTKDAIVTWIKKKIGPGINNITTLDDAERILTSEKKVVLGFLNSLAGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDANAKRPALVLLKREEEKLNLFDGQFVKSAIADFVSSNKLPLVTTFTRESAPSIFESSIKKQLLLFVTSNDSGKFVPIFQEAAKSFKGKLIFVHVEMDNEDVGKPVSDYFGISGNDPAVLAYTGNDDGKKFVLDGEITVDKIKAFGEDFLEDKLKLFYKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIHAPWCGHCQALEPTYNKLAKHLRGIDSIVIAKMDGTTNEHPRAKADGFPTLLFFPAGNKSFDPITVDTDRTVVALYKFLKKNASIPFKLQKPESTPKDGSFDAKERQSGSSKESGGSSSEVKDEL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00242 580 Gene3D Glutaredoxin 301 425 - -
Bva09g00242 580 MobiDBLite consensus disorder prediction 60 76 - -
Bva09g00242 580 Pfam Thioredoxin-like domain 235 406 - -
Bva09g00242 580 PRINTS Thioredoxin family signature 120 129 - -
Bva09g00242 580 PRINTS Thioredoxin family signature 112 120 - -
Bva09g00242 580 PRINTS Thioredoxin family signature 161 172 - -
Bva09g00242 580 ProSitePatterns Thioredoxin family active site. 452 470 IPR017937 -
Bva09g00242 580 CDD PDI_b_family 200 299 - -
Bva09g00242 580 PANTHER PROTEIN DISULFIDE ISOMERASE 3 556 - -
Bva09g00242 580 ProSitePatterns Thioredoxin family active site. 113 131 IPR017937 -
Bva09g00242 580 TIGRFAM pdi_dom: protein disulfide-isomerase domain 98 195 IPR005788 GO:0003756
Bva09g00242 580 TIGRFAM ER_PDI_fam: protein disulfide isomerase 92 560 IPR005792 GO:0003756
Bva09g00242 580 MobiDBLite consensus disorder prediction 44 59 - -
Bva09g00242 580 MobiDBLite consensus disorder prediction 550 564 - -
Bva09g00242 580 MobiDBLite consensus disorder prediction 28 87 - -
Bva09g00242 580 SUPERFAMILY Thioredoxin-like 87 197 IPR036249 -
Bva09g00242 580 PANTHER PROTEIN DISULFIDE-ISOMERASE 3 556 - -
Bva09g00242 580 Gene3D Glutaredoxin 197 300 - -
Bva09g00242 580 ProSiteProfiles Thioredoxin domain profile. 418 539 IPR013766 -
Bva09g00242 580 ProSiteProfiles Thioredoxin domain profile. 80 197 IPR013766 -
Bva09g00242 580 Pfam Thioredoxin 94 194 IPR013766 -
Bva09g00242 580 Pfam Thioredoxin 432 529 IPR013766 -
Bva09g00242 580 SUPERFAMILY Thioredoxin-like 299 429 IPR036249 -
Bva09g00242 580 CDD PDI_b'_family 311 411 - -
Bva09g00242 580 CDD PDI_a_family 95 192 - -
Bva09g00242 580 Gene3D Glutaredoxin 426 540 - -
Bva09g00242 580 Gene3D Glutaredoxin 83 196 - -
Bva09g00242 580 SUPERFAMILY Thioredoxin-like 203 311 IPR036249 -
Bva09g00242 580 MobiDBLite consensus disorder prediction 544 580 - -
Bva09g00242 580 CDD PDI_a_PDI_a'_C 432 534 - -
Bva09g00242 580 SUPERFAMILY Thioredoxin-like 428 539 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00242 Bva-Chr9 1230475 1234678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00242 K09580 - rcu:8264073 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00242 09 1230475 1234678 Bva07g02407 07 19515511 19519401 BWGD
Bva09g00242 09 1230475 1234678 Bva09g00242 09 1230475 1234678 ECH
Bva09g00242 09 1230475 1234678 Bva07g02407 07 19515511 19519401 ECH