Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00213 ATGGGAAACAGAGCCACCCTTTTGATCTTTCTCCTTGTTCTCTGCCATGGAGTTGCCATGGCAATGAGTTACATTAACGTTAACGAAGAAGAGTGGGAAGAAGTGCAAAGGCCAGATCACTGGTTTTTGTTGCGCAACATGAAGCAAGTAATTCAGACCCCAGCAGGGCAGATGAGAGTGGTTAAAAGCTACTTTGGAAGGATTGTGGATCACCCTATGCACATTGGTTTCATCACTATGGAACCAAGGACCCTCTTCATTCCTCAGTATCTTGACTCCAGCTTGATCCTTTTCATTCGCAGAGGAGAAGCAAAGTTGGGATTCATCTACAAGGATGATCTAGTGGAAAGGAGATTGAAGACTGGGGATGTATATCGAATTCCAGCTGGTTCTGCTTTTTACTTGGTGAATGTAGGACAACGTCAGAGACTTCACATAATCGCCAGCATTGACCCATCCGAGAGCTTAGGTGTAGGCGTTTTCCAGCCTTTCTACATTGGTGGTGGAACCAATCCAGCTTCGGTACTTGCAGGGTTCCAGCCTGAAACACTTGAATCTGCATTTAATGCATCGGGCATGGAGATAAGCAGATTGTTCAGCGGGGAACAACAAGGGCCAATTGTCTTCGTGGATCGTCCACATGCCCCAAGTCTATGGACTAACTGGCTTGAGCtgaaagaggaagagagactAGAACATCTGAGGAAATTGATGGATGACCAAGAACAACCTGAAgccgaagaagaagaagaggaagaagatcaAACAAGCTGGTCATGGAGGAAGCTCATGGAATCTGTATTTGGAAATAAAAGCAAGAAGAGACAAGAGAAGGGTACGGGCAAATCCCCTGACTCTTACAATCTCTATGACAGAAAACCAGATTTCAGAAACAACTACGGTTGGAGCGTTGCTCTGGATGCCTCCGATTATTCTCCACTCGAAGGCTCTGACATAGGCGTTTATCTAGTCAATCTCACCGCGGGAGCAATGATGGCACCGCATGTGAATCCAATAGCAACAGAGTATGGAATTATATTGGGAGGATATGGCAGGATCGAGATTGTGTTTCCAAATGGAAGCTCTGCGATGAAGGCCGAAATCAAAGAAGGGGATGTGTTCTTTGTGCCAAGATATTTCGCTTTCTGTCAAATTGCATCTAGAACTGGACCACTGGAGTTCTTTGGGTTCACCACGTCGGCGAGGAGGAATAGGCCTCAGTTTCTTGTGGGTGCTACCTCGCTTCTGAGGACGATGATGGGCCCTGAGCTTGCAGCTTCGTTTGGTGAGAAGGAGGAGACCGTGAGGCGGGTGGTTGAGGCTCAGCACGAGTCTGTAATACTACCCACTCCCAGGGCTGCACCAGGAGGAGGAGAACCCCAGAGGGAGACGGAGAATGAAAACAACAGCAAGGAGAGCCTTAGgattattaaaagaattggcAATGACATGATTACGGGTTTTGATTTAGATTA 1475 0.4508 MGNRATLLIFLLVLCHGVAMAMSYINVNEEEWEEVQRPDHWFLLRNMKQVIQTPAGQMRVVKSYFGRIVDHPMHIGFITMEPRTLFIPQYLDSSLILFIRRGEAKLGFIYKDDLVERRLKTGDVYRIPAGSAFYLVNVGQRQRLHIIASIDPSESLGVGVFQPFYIGGGTNPASVLAGFQPETLESAFNASGMEISRLFSGEQQGPIVFVDRPHAPSLWTNWLELKEEERLEHLRKLMDDQEQPEAEEEEEEEDQTSWSWRKLMESVFGNKSKKRQEKGTGKSPDSYNLYDRKPDFRNNYGWSVALDASDYSPLEGSDIGVYLVNLTAGAMMAPHVNPIATEYGIILGGYGRIEIVFPNGSSAMKAEIKEGDVFFVPRYFAFCQIASRTGPLEFFGFTTSARRNRPQFLVGATSLLRTMMGPELAASFGEKEETVRRVVEAQHESVILPTPRAAPGGGEPQRETENENNSKESLRIIKRIGNDMITGFDLD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00213 491 PANTHER OS03G0336100 PROTEIN 1 457 - -
Bva09g00213 491 Gene3D Jelly Rolls 279 451 IPR014710 -
Bva09g00213 491 Pfam Cupin 72 190 IPR006045 -
Bva09g00213 491 Pfam Cupin 287 435 IPR006045 -
Bva09g00213 491 MobiDBLite consensus disorder prediction 239 258 - -
Bva09g00213 491 SUPERFAMILY RmlC-like cupins 10 445 IPR011051 -
Bva09g00213 491 MobiDBLite consensus disorder prediction 271 290 - -
Bva09g00213 491 CDD cupin_7S_vicilin-like_N 50 210 - -
Bva09g00213 491 Gene3D Jelly Rolls 30 221 IPR014710 -
Bva09g00213 491 CDD cupin_7S_vicilin-like_C 294 445 - -
Bva09g00213 491 SMART Cupin_1_3 287 436 IPR006045 -
Bva09g00213 491 SMART Cupin_1_3 42 196 IPR006045 -
Bva09g00213 491 MobiDBLite consensus disorder prediction 447 473 - -
Bva09g00213 491 PANTHER OS03G0336100 PROTEIN-RELATED 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00213 Bva-Chr9 1093422 1095361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00213 60 456 Miscellaneous Gene Families AT2G18540 31.618 6.48e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00213 - - jre:109009328 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00213 09 1093422 1095361 Bva07g02433 07 19647317 19647741 BWGD
Bva09g00213 09 1093422 1095361 Bva09g00213 09 1093422 1095361 ECH