Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00167 atggataTTGATCTTTCTCCCCAGTTAGCCAAAAAGGTGTACGGAGGTAACGGCGGCTCCTACCATGCATGGTCCCCCTCCGAGCTTCCCATGTTACAACGAGGGAATATTGGCGCCGCTAAGCTAGCCCTTGAGAAGAATGGACTTGCGCTTCCTCGCTATTCTGACTCTTCAAAGGTTGCCTACGTCCTCCAAGGAAATGGTGTTGCTGGAATTATCCTCCCTGAATCAGAAGAGAAGGTTATTGCAATTAAGAAGGGTGATGCAATAGCAATCCCTTTTGGTGTTGTGACATGGTGGTACAATATGGAGGACACAGAGTTGGTTGTTCTTTTCCTGGGTGACACTTCAAAAGCCCACAAGGCTGGTGAATTTACTGATTTTTTCCTGACTGGTTCTAATGGAATTTTCACTGGTTTTTCAACTGAGTTTGTGAGCAGAGCTTGGGACTTGGAAGAGAAGGATGTTAAGATCCTCGTTGGAAACCAATCGGGAAAAGGCATTGTGAAACTGGAAGGAAATGTGAGCATTCCTCAGCCAAAGCAGGAACATAGGAAGGGCATGGTTTTGAATTGTGAAGAGGCTCCGTTGGATGTTGACATTAAGAATGGTGGAAGGGTTGTAGTGTTGAACACTAAGAATCTTCCTTTGGTTGGTGAGGTTGGGCTTGGAGCTGACCTTGTGAGGTTGGATGGAAGAGCCATGTGCTCTCCAGGTTTTTCTTGCGACTCTGCATTACAGGTTACTTATGTAGTTAGGGGAAGTGGGCGAGTTCAAGTTGTTGGTGTTGATGGCCGCAGAGTTCTGGATACTACTTTGAAAGCTGGAAATTTGTTCATTGTGCCAAGGTTCTTTGTAGTCTCCAAGATTGCTGAAGATGATGGAATGGAGTGGTTCTCTATTATCAGCACCCCTAATCCCATATTTACCCACTTGGCTGGAAGTTCTTCCGTGTGGAAGGCTTTATCTCCTTCGATTCTGCAGGCTGCTTTCAATGTTGATTCAGGAGTTGAGCAACTCTTCCGTTCAAAGAGGACTGCTGATGCGATTTTCTTCCCTCCACCCAACTA 1070 0.457 MDIDLSPQLAKKVYGGNGGSYHAWSPSELPMLQRGNIGAAKLALEKNGLALPRYSDSSKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIAIPFGVVTWWYNMEDTELVVLFLGDTSKAHKAGEFTDFFLTGSNGIFTGFSTEFVSRAWDLEEKDVKILVGNQSGKGIVKLEGNVSIPQPKQEHRKGMVLNCEEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGRAMCSPGFSCDSALQVTYVVRGSGRVQVVGVDGRRVLDTTLKAGNLFIVPRFFVVSKIAEDDGMEWFSIISTPNPIFTHLAGSSSVWKALSPSILQAAFNVDSGVEQLFRSKRTADAIFFPPPN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00167 356 CDD cupin_11S_legumin_N 4 173 - -
Bva09g00167 356 Gene3D Jelly Rolls 195 356 IPR014710 -
Bva09g00167 356 PANTHER - 2 347 - -
Bva09g00167 356 SMART Cupin_1_3 3 157 IPR006045 -
Bva09g00167 356 SMART Cupin_1_3 195 339 IPR006045 -
Bva09g00167 356 PANTHER OS03G0336100 PROTEIN-RELATED 2 347 - -
Bva09g00167 356 Gene3D Jelly Rolls 4 194 IPR014710 -
Bva09g00167 356 CDD cupin_11S_legumin_C 198 353 - -
Bva09g00167 356 Pfam Cupin 199 335 IPR006045 -
Bva09g00167 356 Pfam Cupin 11 156 IPR006045 -
Bva09g00167 356 SUPERFAMILY RmlC-like cupins 16 345 IPR011051 -
Bva09g00167 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Bva09g00167 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Bva09g00167 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Bva09g00167 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Bva09g00167 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00167 Bva-Chr9 789673 791489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00167 35 333 Miscellaneous Gene Families AT2G18540 23.496 1.94e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00167 - - gmx:100782055 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00167 09 789673 791489 Bva07g02472 07 19898490 19900389 BWGD
Bva09g00167 09 789673 791489 Bva09g00167 09 789673 791489 ECH