Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00160 ATGGCGGTGACTTCCAGTTCCAAAGGAAGAACAAGTGACCTCCAAATCTcgaaaaaatggaaagacaGTGAAACTAGCCCTGAGAGAAACAAAGTTTGGACTGAACCTAAGAtcaaaaaacagagaaaagtcTCTGTTGTTTACTATCTTTCCAGGAATGGCCAGCTTGAGCATCCGCATTTCATGGAGGTCCCTCTCTCCTCCCCTCAAGGACTCTATCTCAGAGATGTAATCAACCGCTTGAACGTCCTCCGAGGCAAAGGCATGGCTATCATGTACTCCTGGTCTTCTAAACGGAGCTACAGAAACGGTTTCGTTTGGCACGACTTATCAGAGAAGGATTTTATCTTTCCAACGCAAGGGCAAGACTACATTCTCAAAGGATCGAAGATTCTAGACACTCCAATGTCATCTGAGACGGCGTCGTCTCGATCTCTGTCTCTCAGGCCACCAGAGGAAACCCGCAAGTCTGAAAATGATTCTGATTTTTCAGTAAACTCGAGGAGACGCAATCTGTCGTGGAGCGCCATAGACCTTCAAGAGTACAGAGTTTACAAGAATGAATCGTTCGGTGACTCAACTGATAAAGTCGCCGCCGACGCATCGACTCAGACCGACGATAAGCGAAGGCGAAGGCGAGCCagtagagaagagaaagcagCAATTGAAAAGACTCAATCCCAACTAATCTGTGATAATCACAGTACGGAGCTGAGCAGAGACGAAATTTCACCTCCACCGTCGGATTCGAGTACCGAAACCCTGGAAACCCTGATGAAGTCTGATGGACGGCTGGCATTGTTCTCTGCGGAACCCAATAAGGAGGATGGTGCAAATCTGACCGCTGATAATTGTCCAAGGGGGAACGGGAGGATGAAAGCGTCGTCGATTCTTATACAGCTATTATCCTGCGGATCAATTTCTTTCAGGGATTGTGGACCCACTTCCCGTAAACACCAAGGGTTCTCATTGATCACAAACTATAAGGCCCAGTTGCCCCGCAGATCAGAGAATCAAGAGACAACCATGGAAAATCCAGAGTTGAATAAGGAACATTTTAGTGGGAGCTTGATCGAAACTACAAAAACAGATTCTCCTTCCATGAATACAGATAGCGGTTCACAGTTGCAAATCATGGAGCAAGGAGACGGCGTGGGGGCAAAGTGCACCAAGGAAATCTA 1181 0.4513 MAVTSSSKGRTSDLQISKKWKDSETSPERNKVWTEPKIKKQRKVSVVYYLSRNGQLEHPHFMEVPLSSPQGLYLRDVINRLNVLRGKGMAIMYSWSSKRSYRNGFVWHDLSEKDFIFPTQGQDYILKGSKILDTPMSSETASSRSLSLRPPEETRKSENDSDFSVNSRRRNLSWSAIDLQEYRVYKNESFGDSTDKVAADASTQTDDKRRRRRASREEKAAIEKTQSQLICDNHSTELSRDEISPPPSDSSTETLETLMKSDGRLALFSAEPNKEDGANLTADNCPRGNGRMKASSILIQLLSCGSISFRDCGPTSRKHQGFSLITNYKAQLPRRSENQETTMENPELNKEHFSGSLIETTKTDSPSMNTDSGSQLQIMEQGDGVGAKCTKEI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00160 393 PIRSF UCP031043 12 377 IPR021182 -
Bva09g00160 393 MobiDBLite consensus disorder prediction 135 165 - -
Bva09g00160 393 MobiDBLite consensus disorder prediction 195 254 - -
Bva09g00160 393 MobiDBLite consensus disorder prediction 201 223 - -
Bva09g00160 393 MobiDBLite consensus disorder prediction 1 31 - -
Bva09g00160 393 MobiDBLite consensus disorder prediction 14 31 - -
Bva09g00160 393 PANTHER OS01G0839200 PROTEIN 10 389 - -
Bva09g00160 393 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 10 389 IPR010369 -
Bva09g00160 393 Pfam Protein SOSEKI, plant 44 366 IPR010369 -
Bva09g00160 393 MobiDBLite consensus disorder prediction 149 165 - -
Bva09g00160 393 MobiDBLite consensus disorder prediction 226 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00160 Bva-Chr9 747615 750824 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00160 - - vvi:100245073 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00160 09 747615 750824 Bva09g00160 09 747615 750824 ECH
Bva09g00160 09 747615 750824 Bva07g02481 07 19939418 19943417 ECH