Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02272 ATGCCTACACTTTCCGATGCCTTTGGAGCTCACCCTGTGTACCTTCAACAAAAGCACCCTGACTTCAATTCCCTACAAGAACTCCCTGATTCCTACGCGTGGACACAACGCGACGACGTTTACAACCCTTGCCCTTCTTCTCCGAACACAGTACTGGCCGAAGAAAATGTCCCTGTTGTCGATCTCAAAGACCCGAATGCTCCAAAGCTCATAGGCCATGCATGCAAAACTTGGGGAGTTTTCCAAATAATAAACCATGGCATCCCCACAACACTTCTCGATGACATTGAGCGCACTGGCAACAccctcttctctcttcctccGCATCAAAAGCTCAAAGCAGCTCGCTCCCCTGAGGGCGTTTCCGGCTACGGCGTTGCTCGTATCTCCTCCTTCTTCCAAAAGCTCATGTGGTCTGAGGGATTCACAATTGCCGGATCACCTCTTGAGCATTTCCGCCAACTCTGGCCCCAAGAATACACCAAATACTGTGATATCGTCCTTGAGTATGaggaagaaatgaaaaagctaGCGGGAAAGCTAATGTGGCTCATGTCGGCTTCACTTGGCATATCAAAATTAGAAGACATAAAATGGGCTGGCCCAAGAGGAGAATTCAAGGGGGCTTGTGCTGCTTTACAATTAAACTCCTACCCGACTTGCCCTGACCCGGATCGGGCCATGGGTCTTGCCGCCCACACCGACTCCACCCTTCTCACAATCCTATACCAAAATGGTATCAGTGGGTTGCAAGTTTTACGAGAGGGAACCGGGTGGATCACCGTCCCACCACTTCCCGGGGGACTAGTAATCAATGTTGGTGATCTCTTCCACATTTTATCAAACGGTTTGTATTCGAGTGTGCTCCACCGAGCCGTGGTGAACCGGACTCGGCCACGCCTTTCGGTTGCGTATCTTTATGGACCACCAACTAGTGTTCAAATCTCTCCACATCCGAAGCTAGTAAGCCCAAGTCGTCCTCCATTGTACCGTGCAGTGACTTGGAACGAGTACCTTGGAACCAAAGCAAAGCATTTCAATAAGGCACTGTCTTCAGTCCAGCTTTGCGTACCAATTAGCAGTAACACTGGTGTACAAGTTGGCTA 1106 0.4828 MPTLSDAFGAHPVYLQQKHPDFNSLQELPDSYAWTQRDDVYNPCPSSPNTVLAEENVPVVDLKDPNAPKLIGHACKTWGVFQIINHGIPTTLLDDIERTGNTLFSLPPHQKLKAARSPEGVSGYGVARISSFFQKLMWSEGFTIAGSPLEHFRQLWPQEYTKYCDIVLEYEEEMKKLAGKLMWLMSASLGISKLEDIKWAGPRGEFKGACAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNGISGLQVLREGTGWITVPPLPGGLVINVGDLFHILSNGLYSSVLHRAVVNRTRPRLSVAYLYGPPTSVQISPHPKLVSPSRPPLYRAVTWNEYLGTKAKHFNKALSSVQLCVPISSNTGVQVG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02272 368 Gene3D - 18 340 IPR027443 -
Bva08g02272 368 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 352 - -
Bva08g02272 368 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 352 - -
Bva08g02272 368 Pfam 2OG-Fe(II) oxygenase superfamily 213 309 IPR044861 -
Bva08g02272 368 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 309 IPR005123 -
Bva08g02272 368 SUPERFAMILY Clavaminate synthase-like 16 346 - -
Bva08g02272 368 Pfam non-haem dioxygenase in morphine synthesis N-terminal 57 158 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02272 Bva-Chr8 14797704 14799459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02272 71 350 Glycosyltransferase AT5G59530 32.180 1.27e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02272 K04124 - tcc:18595845 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02272 08 14797704 14799459 Bva02g02452 02 23569359 23570818 BWGD
Bva08g02272 08 14797704 14799459 Bva08g02272 08 14797704 14799459 ECH