Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02172 atGAAGGGGGAAAATGAGGAGGCCAAGGAGATAAGCCCAATGTTTCCCTGGCTTCACATTAAAGATGCAGAGAAAGGAGGACCAAAAGCACCCCCAAGGAACAAAATGGCTCTCTACGAACAATTCATCAAACCCTCTCAAAGTTTTGCCTATGGGTCATCATCCTTGTTTCCTCTTCCACTCAGAAACAGCTGCCAAGTTCCTTCAACGCCTGGCCATGTTGGTAGCAGGCAAAGCATCCAATTCTGCACCTCTACTGCACCATCTTATCTGGATGAGAAGATTCTTGCTAATAATTCCAGGGAAGTTAACTTCAACAAATTGAAGCCAGATGATTTATTCATTTGTAAATATTCTCTGCAAAAATTTGATGGTAAAGATGATTTTGTAACTCCTTACTCTGCTCACGGAAGAAAATCATGCTCTAGCATCAGCCAGAATAACGAAGACGAACAAAAACTTGCTCACCTTCAATCAAGCTATTCATTAGAAAGTCAAAATTCTTTGAGAAAGACGGTATACTCAACTGGTTCTATAGAACTGAAGTCAGCACAATATGGGAAGAACCAGAAAGAAGAGCTTTCAGAAGTCAGTCAAACTAATCAGAAACCAGAGGAAGGTTCTCCTCATCCATTAGCTGGTTTTGGTGATATGACAGATGCATCATCAATTGAAGTTAAGACTCCTAAACTACTTCAAGGTGGGAATGCTCATACACATAAAGAGCATGCAGATCTGAAAGACAAAATCAACCTCAGGGATGGTTACTTGGAGAAGATGGCAGTGAGTGATGTTCACAAACATCCTTATGGGCTAGAAATTGGTGGCAAGTGTTATCAGATCAGGAGAGGCGGGCATAAAGATGATGATATGTGTAGACAGTATGATGTGTCAAATAAGCCCATCTCAGACTCTATATTCGGCATGGATTTTTCCCCTGATGATGTTCTTGGAGTTATTGGTGAAAAACAATTTTGGAAAGCAAGAGGAACTATCATCAATTGCATTGCTATTTTCAGTCAACAAAGAATCTTCTTTGTCCAACTGTTCGAGTTGCATAGACTGATAGAGGTACAAAGATCATTTGCTGGATCACCGCATCTATTACTTGAAGATAGCCTTCAAGTGAATAAACCTTCAGTAGAAGTATCTGCACCAAAGAAATTACCATCTGAATTTGTCACTGAACGACCATCCTCAAATGTCAAACTGGATGTTAAATCTGAGAAGCCCACTACTTCTGAGCTTCCAGAAAATAATGCAGTTATGAAGGTTCCCGTTCCTTGTATCAGCAACAGTATGAGTAAAGGCATTGTCAATCAGATGTCAAATAATGGCCATCATTCAGGAAGCCATCAGATAGTTCATGCAGCAATGAATAACAAACAATCTGCATGTTGTATCTACCCACCACCAGGAAATCAGTGGTTAGTTCCTGTCATGTCCCCATCTGAAGGCCTTATATACAAGCCAGTCATGGGGTCGTACCCTCCAAATGTAGGTTTCATGGCACCGGTATATAGTGCTTGTGGCCATATGAGCCTCAGTTCTGGAAGCAAGGATGTTTCAGACTCAGCTCATGTCATTCTAGCTTCTCACCATGGAATTGGAATTCCTTCTGGCACACCTTTACCTCAGTTCTTCCCACCACTTGTCCCTCCAATAATGCATCCGTCTATATCTGGAGATGCCGATTCTGCAATATTGAGCCAAAGCTCAAGTAATATCCCCAGTCAAATGAGTAAACTGATGCCAACCGAGTTTCAAGATTTTCACTCATCCAAAGTGTTACAAAGAAGTACAGCTAGTAGTCCAActaagaagaggaagaaaggaGACGTACTTCCGTTGTTTCCTGTGGCACCAACATCTTGGACGGCAGCTCCAGCAGATCAGAATGCATTAGTTATTGACCAGCAGCCACGAGTAATCAAAGCTTTACCTCACAGTCCAAGATTCGCAACTGAATCAGCAGCCAGTATATTCAGGTCAatacaagaagaaagaaaacatttgtA 2018 0.4073 MKGENEEAKEISPMFPWLHIKDAEKGGPKAPPRNKMALYEQFIKPSQSFAYGSSSLFPLPLRNSCQVPSTPGHVGSRQSIQFCTSTAPSYLDEKILANNSREVNFNKLKPDDLFICKYSLQKFDGKDDFVTPYSAHGRKSCSSISQNNEDEQKLAHLQSSYSLESQNSLRKTVYSTGSIELKSAQYGKNQKEELSEVSQTNQKPEEGSPHPLAGFGDMTDASSIEVKTPKLLQGGNAHTHKEHADLKDKINLRDGYLEKMAVSDVHKHPYGLEIGGKCYQIRRGGHKDDDMCRQYDVSNKPISDSIFGMDFSPDDVLGVIGEKQFWKARGTIINCIAIFSQQRIFFVQLFELHRLIEVQRSFAGSPHLLLEDSLQVNKPSVEVSAPKKLPSEFVTERPSSNVKLDVKSEKPTTSELPENNAVMKVPVPCISNSMSKGIVNQMSNNGHHSGSHQIVHAAMNNKQSACCIYPPPGNQWLVPVMSPSEGLIYKPVMGSYPPNVGFMAPVYSACGHMSLSSGSKDVSDSAHVILASHHGIGIPSGTPLPQFFPPLVPPIMHPSISGDADSAILSQSSSNIPSQMSKLMPTEFQDFHSSKVLQRSTASSPTKKRKKGDVLPLFPVAPTSWTAAPADQNALVIDQQPRVIKALPHSPRFATESAASIFRSIQEERKHL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02172 672 MobiDBLite consensus disorder prediction 185 206 - -
Bva08g02172 672 MobiDBLite consensus disorder prediction 185 218 - -
Bva08g02172 672 PANTHER PROTEIN EARLY FLOWERING 3 1 672 IPR039319 GO:2000028
Bva08g02172 672 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02172 Bva-Chr8 14279517 14284297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02172 K12125 - gmx:102663657 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02172 08 14279517 14284297 Bva02g02327 02 22927332 22933168 ECH
Bva08g02172 08 14279517 14284297 Bva08g02172 08 14279517 14284297 ECH