Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02171 ATGCAGTCAAGGATGGTGGCTTTGGAGGAAGGGAAGGAGCCTGCCACCCAATTTAGGAATAGTCCGTCTAGACCCTTCCCTTTGGGATTGCTGAAATTCTTCTTGCTATTCTTGGTTCTGGGCTTTGGAGCTTCTATTGTTAGCATGTATATGATACGGCGTTTCGGTATTCAGAATATGGCCCTCGGACAGTCTACCTTTATGCCTTGCTTTGAGCAGCCAACCAGAGTGGAAAGTTTGATTAGGCCTCCTTCAAATCTAATGCATAACATGAATGACAGTGATCTGTTTTGGCGGGCTTCTTTTGTTCCGAGAATTAAGAGTTATccatttaaaagaaatcccaaGATTGCCTTCATGTTCTTAACAAAGGGGCCGCTGCCTATGCAACCACTCTGGGAGAGGTTCTTTAAAGGGCATGAGGGGGTTTATTCTATCTATATCCATTCTTTGCCATCTTACACTGCAGACTTTTCACCCTCATCAGTTTTTTACAGAAGGCAGATCCCAAGCCAGGTGTCTGAGTGGGGAAAGATGAGTATGTGTGATGCTGAAAGAAGACTCTTGGCTAATGCATTGCTTGATATCTCAAATGAGTGGTTTGTCCTGCTTTCTGAGTCCTGCATTCCTCTCCAGAATTTTAGCATTGTCTACCGTTACATATCACGGTCATGGTATAGCTTCATGGGTGCATTTGATGAACCTGGTCCCTATGGAAGAGGACGATATGATGAAAACATGGCACCCGAGGTCAACCTTAGCAACTGGCGTAAAGGGTCTCAGTGGTTCGAAATTAATCGGGAACTTGCAGTTAGGATTGTTGAAGACGACGCTTACTATCCCAAGTTCAAAGAATTCTGCGTACCTCATGCTTGTTATGTCGATGAGCACTATTTCCAGACAATGTTAACCATTCAAACTCCCCATCTTTTGGCAAATAGGAGCCTTACATATGTTGACTGGTCCAGAGGTGGTGCTCACCCAGCTACCTTCGGCAGGGAAGACATCAAAGAGCAATTCTTCAAGAAGATTTTGGAAGATCAGTCATGCCTTTATAATAACCAGCCAACTTCCCTTTGTTTCCtatttgcaagaaaaattgCACCTAATGCTTTGGATGCTCTTTTAGACATAGCTCCAAAAGTTCTAGGAATTTG 1157 0.427 MQSRMVALEEGKEPATQFRNSPSRPFPLGLLKFFLLFLVLGFGASIVSMYMIRRFGIQNMALGQSTFMPCFEQPTRVESLIRPPSNLMHNMNDSDLFWRASFVPRIKSYPFKRNPKIAFMFLTKGPLPMQPLWERFFKGHEGVYSIYIHSLPSYTADFSPSSVFYRRQIPSQVSEWGKMSMCDAERRLLANALLDISNEWFVLLSESCIPLQNFSIVYRYISRSWYSFMGAFDEPGPYGRGRYDENMAPEVNLSNWRKGSQWFEINRELAVRIVEDDAYYPKFKEFCVPHACYVDEHYFQTMLTIQTPHLLANRSLTYVDWSRGGAHPATFGREDIKEQFFKKILEDQSCLYNNQPTSLCFLFARKIAPNALDALLDIAPKVLGI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02171 385 Pfam Core-2/I-Branching enzyme 117 344 IPR003406 GO:0016020|GO:0016757
Bva08g02171 385 PANTHER - 7 383 - -
Bva08g02171 385 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 7 383 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02171 Bva-Chr8 14274589 14278436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02171 - - gmx:100793448 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02171 08 14274589 14278436 Bva02g02325 02 22919144 22922799 ECH
Bva08g02171 08 14274589 14278436 Bva08g02171 08 14274589 14278436 ECH