Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02149 ATGGGCTTCGAGCTCAGAATGTGGAATGTGTTTGTGCTGGTGCTCCTGGCATGTTCTCTGATTGGTTCTGTGAGAGCCTCTGTGTCTTATGACTCCAAGGCCATCATCGTTAATGGGCAGAGAAGGATACTCTTCTCTGGATCCATTCATTACCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCCAAGGAAGGAGGCTTGGATGTGATTCAGACATACGTTTTCTGGAATGGGCATGAACCTTCACCCGGCAAATATTATTTTGAGGGGAACTATGATCTGGTGAAATTCGTAAAGCTGGTGCAGCAAGCAGGGCTTTATCTTAATCTGAGGATTGGTCCTTATGTCTGTGCTGAGTGGAACTTTGGGGGTTTCCCTGTTTGGCTGAAGTACATTCCTGGTATCAGCTTCAGAACAAATAATGGGCCATTCAAGTttcaaatgcaaaaatttaCCAAGAAAATAGTGGATATGATGAAAGCAGAAAGGTTGTTTGAGTCTCAAGGTGGTCCAATAATTCTATCCCAGATTGAAAATGAATATGGACCTATGGAGTACGAAATTGGTGCTCCCGGTAAAGCTTATACTCAATGGGCAGCACACATGGCTTTAGGGCTTGGTACTGGTGTTCCATGGATTATGTGCAAGCAAGATGATGCTCCTGATCCTATTaTTAACACTTGCAATGGCTTCTATTGCGATTATTTCTCTCCAAACAAGGCCTCTAAACCAAAAATGTGGACAGAAGCTTGGACTGGCTGGTATACTGAATTTGGAGGTGCAGTTCCTCATCGACCTGCTCAAGATATGGCATTTGCAGTTGCAAGATTTATACAGAAAGGGGGTTCATATGTTAACTATTACATGTATCATGGGGGAACAAATTTTGGTCGAACTGCCGGGGGTCCATTTATTGCTACAAGCTATGATTATGATGCTCCTCTTGATGAATATGGACTGCTCAGGCAACCAAAGTGGGGCCATCTCAAGGATTTACACAGAGCAGTAAAGCTCTGTGAACCTGCTTTAGTATCTGCAGATCCCACTGTAACACGGCTTGGAAACTTCCAAGAGGCTCATGTCTTCAAATCAAAGTCAGGAGCTTGTGCTGCATTCCTTGCAAACTATAATCCAAAATCTTATGCAACTGTGGCATTTGGAAATATGCATTACAACTTGCCCCCTTGGTCTATAAGCATTCTTCCGGACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCCCAGAGTGCACAGATGAAGATGACTCCTGTTCCTATTCATGGAGGACTCTCTTGGCTATCATTCAATGAAGAGACAACATCTACTGATGATAGTTCATTCACCATGACTGGGCTGTTGGAGCAGCTAAATATAACAAGAGACGTCTCTGACTACTTGTGGTACAGCACAGATGTTGTCATTAATTCCAACGAAGGATTTTTAAGGAATGGAAAGGACCCTGTTCTTACAGTCTTATCTGCTGGTCATGCTTTGCATGTTTTTGTCAACGATCAGCTAGCAGGAACTGCATACGGAAGTTTAGAATTCCCTAAGCTAACATTTAGCCAGGGTGTGAAGCTCAGAGCTGGTGTTAACAAAATCTCCCTGCTAAGTGTTGCTGTTGGTCTTCCGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTCCTTGGCCCAATTACATTGAATGGTCTCAATGAGGGGAGAAGAGACTTATCATGGCAGAAATGGTCTTACAAGGTTGGTCTCAAAGGAGAATCTTTGAGTCTTCATTCTCTCAGTGGAAGTTCCTCAGTCGAGTGGGTTCAGGGCTTTTTTGTTTCCCGAAGGCAGCCATTGACATGGTACAAAACTACTTTCGACGCCCCACTTGGAGTTGCACCATTGGCTTTAGACATGAGCAGCATGGGCAAAGGTCAAGTATGGCTAAATGGACAAAGTCTTGGCCGCTACTGGCCTGCTTACAAAGCTTCTGGTTCCTGTGGTTACTGTGACTACACTGGAACTTATTCTGAGAAGAAATGTTCAAGTAACTGTGGGGAGGCTTCTCAAAGATGGTATCACGTTCCTAAGTCATGGCTGAAGCCAACTGGAAATTTATTAGTTGTGTTTGAAGAATTGGGTGGAGATCCGAATGGCATCTTGTTGGTTAGACGGGACATAGATAGTGTATGtgcttatatttatgaatGGCAGCCAAATCTTATAAGTTATCAGATGCAATCTTCTGGTAAAGTGAAGAACCCAGTGAGGCCAAAAGTACATTTACAATGTGGCCCTGGGCAGAAAatctcaaaaatcaaatttgctAGCTTTGGTACTCCAGTAGGAATGTGTGGAAACTATCGCGAAGGAGGTTGTCACGCCCACAAGTCCTATGATGCCTTTGAAAGGAACTGTGTCGGGCAAAGCTGGTGCACAGTAACTGTGTCACCTGAAAACTTTGGAGGAGATCCATGTCCTAAAGTGATGAAACAACTTGCGGTGGAGGCTGTTTGCACCTG 2525 0.4349 MGFELRMWNVFVLVLLACSLIGSVRASVSYDSKAIIVNGQRRILFSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQAGLYLNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTNNGPFKFQMQKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGKAYTQWAAHMALGLGTGVPWIMCKQDDAPDPIINTCNGFYCDYFSPNKASKPKMWTEAWTGWYTEFGGAVPHRPAQDMAFAVARFIQKGGSYVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAVKLCEPALVSADPTVTRLGNFQEAHVFKSKSGACAAFLANYNPKSYATVAFGNMHYNLPPWSISILPDCKHTVYNTARVGSQSAQMKMTPVPIHGGLSWLSFNEETTSTDDSSFTMTGLLEQLNITRDVSDYLWYSTDVVINSNEGFLRNGKDPVLTVLSAGHALHVFVNDQLAGTAYGSLEFPKLTFSQGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLNEGRRDLSWQKWSYKVGLKGESLSLHSLSGSSSVEWVQGFFVSRRQPLTWYKTTFDAPLGVAPLALDMSSMGKGQVWLNGQSLGRYWPAYKASGSCGYCDYTGTYSEKKCSSNCGEASQRWYHVPKSWLKPTGNLLVVFEELGGDPNGILLVRRDIDSVCAYIYEWQPNLISYQMQSSGKVKNPVRPKVHLQCGPGQKISKIKFASFGTPVGMCGNYREGGCHAHKSYDAFERNCVGQSWCTVTVSPENFGGDPCPKVMKQLAVEAVCT 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02149 841 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Bva08g02149 841 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Bva08g02149 841 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Bva08g02149 841 Gene3D - 752 841 IPR043159 -
Bva08g02149 841 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Bva08g02149 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bva08g02149 841 PANTHER BETA-GALACTOSIDASE RELATED 10 835 IPR001944 GO:0004553|GO:0005975
Bva08g02149 841 SUPERFAMILY Galactose-binding domain-like 582 750 IPR008979 -
Bva08g02149 841 Gene3D - 610 732 - -
Bva08g02149 841 Gene3D Glycosidases 22 343 - -
Bva08g02149 841 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Bva08g02149 841 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Bva08g02149 841 PANTHER BETA-GALACTOSIDASE 10 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02149 Bva-Chr8 14153279 14159018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02149 10 841 Glycoside Hydrolase AT3G13750 80.168 0.0 1421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02149 - - gmx:100781074 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02149 08 14153279 14159018 Bva02g02295 02 22737856 22743822 BWGD
Bva08g02149 08 14153279 14159018 Bva08g02149 08 14153279 14159018 ECH