Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02144 ATGGCTCCAGTTGGTGCAGTCAAATTCTTGTTCTGCTTAGCTTTATGCCTCTTCAACTCTCTCCCTCCTTGTCAAgGTAAACAGGATTCCTATCCATACCGGTACCCATTTATCAGAAAGGCAAgctcattttcatcatcatcaatttcAATCACCGTCAACAATAATGGCTATGACTACATAATAGTGGGAGGTGGCACAGCAGGGTGCCCTTTGGCTGCAActctttctcaaaatttcaGTGTTTTGTTGCTTGAAAGAGGAGGTGTTCCTTtcacaaatccaaatgtctCATTTTTGGATAACTTTCACATTACCTTGGCGGACACTTCATCAACTTCAGCTTCCCAATACTTCGTTTCAACAGATGGAGTCCTTAATGCTAGGGCTAGGGTTCTTGGTGGTGGCAGTTCCATTAATGCTGGCTTCTACACCAGAGCAAGCTCAAGGTTTATTAAGAAAATGGGTTGGGATGCAAGCATAGTTAAAGAGTCTTATCCATGGGTTGAGAAGCAAGTTGTTCACCGTCCAAAGTTTGAACCGTGGCAAAGAGCACTGAGGGACAGCCTCCTAGATGTTGGTGTGTCTCCTTTTAATGGCTTCACCTATGATCATATCTATGGAACCAAGGTTGGTGGCACCATTTTTGATAGATTTGGTCGCCGCCACACATCCGCTGAATTGCTTGCTACAGGAAAGCCTAGAAAACTCACTGTTTTGGTCTATGCTACTGTCCAAAAGATTGTTTTTGATCAAATAGgAAAAAGGCCAAAAGCTGTAGGAGTTATCttcaaagatgaaaatgggAAACAGCATCTCGCAAATCTGGGAAAAAATAAGCAGAATGAAATAATTGTGTCTACCGGGGCAATTGGGACTCCTCAATTGCTAATGCTTAGTGGAATTGGTCCAAAAGCAGAACTCCAAAAGTTGAGCATCCCTGTGGTGCTTGACAACCCATTTGTTGGGAAGGGCATGGCTGATAACCCTATGAACACAGTTTTTGTTCCTACTAATAGGCCAGTTAAGCAGTCACTTATAGAAACTGTGGGTATTACCAAGTTGGGTGTCTACATTGAAGCCAGCAGTGGCTTTGGTCAGTCCACCGATAGCATTCGCTGCCACCATGGTATTCTGTCAGCTGAGATTGGGCAGCTTTCCACAATTCCTCCCAAACAAAGATCACCAGAAGCTGTTCAAGCTTTCATCAAAAGCAAGCGAGAACTACCGGTTGAAGCATTCAGAGGAGGTTTCGTTTTGTCCAAGGTTGCCAATCCTTGGTCCACTGGTGAGCTCAGGTTGGTCAACACCAATGTGGAAGACAACCCTGCAGTCACCTTCAACTACTTCAATCACCCTTATGATCTTAAGCGTTGCGTGGAGGGAATTCGCTTAGCAACAAAGGTCGTGCAGTCACAGCACTTCACAAACCTCACTTTGTGTGACAGACAATCTACCGAGAAATTGCTTAACCTCAGTGTCAAGGCTAATGTCAACCTCATTCCCAAGCATATCAATGACACTGAATCACTAGAACAGTATTGCAGAGACACTGTGATCACAATTTGGCACTACCATGGTGGGTGTCATGTTGGGAAGGTGGTTAGCCCTGACTTTAAAGTTCTTGGTGTTGACAAACTCCGTGTGGTGGATGGTTCAGTATTTCCTGAGTCACCAGGGACTAATCCTCAAGCCACTGTGATGATGATGGGAAGGTACATGGGAGTGAAGATTTCAAGAGACAGGTTTTGTTCATCAAGAAATGACACTTCTAATTCATTGACAAGAGCTACCAGATCATACTTCTGCTTTCTGAGTCAGTTTGCCTA 1829 0.4254 MAPVGAVKFLFCLALCLFNSLPPCQGKQDSYPYRYPFIRKASSFSSSSISITVNNNGYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNPNVSFLDNFHITLADTSSTSASQYFVSTDGVLNARARVLGGGSSINAGFYTRASSRFIKKMGWDASIVKESYPWVEKQVVHRPKFEPWQRALRDSLLDVGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTSAELLATGKPRKLTVLVYATVQKIVFDQIGKRPKAVGVIFKDENGKQHLANLGKNKQNEIIVSTGAIGTPQLLMLSGIGPKAELQKLSIPVVLDNPFVGKGMADNPMNTVFVPTNRPVKQSLIETVGITKLGVYIEASSGFGQSTDSIRCHHGILSAEIGQLSTIPPKQRSPEAVQAFIKSKRELPVEAFRGGFVLSKVANPWSTGELRLVNTNVEDNPAVTFNYFNHPYDLKRCVEGIRLATKVVQSQHFTNLTLCDRQSTEKLLNLSVKANVNLIPKHINDTESLEQYCRDTVITIWHYHGGCHVGKVVSPDFKVLGVDKLRVVDGSVFPESPGTNPQATVMMMGRYMGVKISRDRFCSSRNDTSNSLTRATRSYFCFLSQFA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02144 609 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 528 - -
Bva08g02144 609 Pfam GMC oxidoreductase 426 572 IPR007867 GO:0016614
Bva08g02144 609 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 583 - -
Bva08g02144 609 Gene3D - 175 521 - -
Bva08g02144 609 ProSitePatterns GMC oxidoreductases signature 2. 289 303 IPR000172 GO:0016614|GO:0050660
Bva08g02144 609 Gene3D - 58 571 IPR036188 -
Bva08g02144 609 PANTHER OSJNBA0019K04.7 PROTEIN 2 583 - -
Bva08g02144 609 PIRSF Alcohol_oxidase 39 590 IPR012132 GO:0050660
Bva08g02144 609 Pfam GMC oxidoreductase 58 330 IPR000172 GO:0016614|GO:0050660
Bva08g02144 609 SUPERFAMILY FAD/NAD(P)-binding domain 54 581 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02144 Bva-Chr8 14122740 14127205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02144 58 589 Miscellaneous Gene Families AT5G51950 52.328 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02144 K15403 - gmx:100779461 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02144 08 14122740 14127205 Bva02g02290 02 22701723 22706636 BWGD
Bva08g02144 08 14122740 14127205 Bva08g02144 08 14122740 14127205 ECH