Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02142 ATGACAGATAGAGTCCACCCTACGGCAAAACCCGCGGCCAACGGCGCCGCGAACTCAACTTTCCCGGCCACCAAGGCGCAACTCTACGGCGCCGCCCGTCCCACTTACCGCCCCCAACCCCAGCACCGCCGGAGCCGCCGTGGATGCTGCTGCACCTTCTGCTTCTGGTTCATCCTCATCATCCTTATCCTCCTACTCCTCATCGGCGTCGCCGGTGTCGCCGTCTATCTCCTCTACCGCCCCCACCGCCCTTCCTTCACCGTCACCTCCCTCAAGCTCTCGTACCTCAATCTCACTTCGTCATCAACCCTGAACTCCAAATTCGACCTCAACATCACCGCGCAAAATCCCAACAAGAAAATCGACTTCTTCTACAAACCCGCCTCTATTTCAATTCTCTCTGATGATGTCGATGTCGGCGACGGGACAGTTCCGGCTTTCGAGCAAGGAAAACGGGAGACGACTCTGCTGAAGTCTTCGATTCTAAGCAGTGGGCAGGAACTGGACACTGACGCTGCGAGCCAATTGAAGGCGAACATGAAGAGCAAAACTGGGTTGCCATTGACGGTGAGATTGGACACGAAGGTGAAAGCAAAGATGGGTGGACTGAAGACGCCCAATGTTAGGCTCAGAGTTTCCTGTGAAGGGATCAGCGTTACTCTTCCCACGGGCAAGAAGCCCGCGACGGCTTCCATATCAAATGGCAAGTGCGATGTTGATGTGAGATTCAAGCTCTGGAAATGGACTGTTGGATG 755 0.5523 MTDRVHPTAKPAANGAANSTFPATKAQLYGAARPTYRPQPQHRRSRRGCCCTFCFWFILIILILLLLIGVAGVAVYLLYRPHRPSFTVTSLKLSYLNLTSSSTLNSKFDLNITAQNPNKKIDFFYKPASISILSDDVDVGDGTVPAFEQGKRETTLLKSSILSSGQELDTDAASQLKANMKSKTGLPLTVRLDTKVKAKMGGLKTPNVRLRVSCEGISVTLPTGKKPATASISNGKCDVDVRFKLWKWTVG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02142 251 Gene3D - 78 223 - -
Bva08g02142 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 249 - -
Bva08g02142 251 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 9 249 - -
Bva08g02142 251 Pfam Late embryogenesis abundant protein 111 214 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02142 Bva-Chr8 14114076 14115189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02142 25 238 EF-hand Containing Proteins AT5G21130 26.606 4.89e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02142 - - gmx:100819194 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02142 08 14114076 14115189 Bva02g02288 02 22691026 22692579 BWGD