Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01996 ATGGGCAGCACTAGTGCAACCACAAAGCCATTGTTATTATCAGACCTCGCCTCCAGTACTGTCCGGCTGAGCCATGTCCCCTCCAATTTCATCAGACCCCTCGGTGATCGTCCAAATCTTCAAGAGGTTCAATCCTCCGACGCCGTTTCGATTTCTCTCATAGACCTTCGAGGCCTTCGTGGCCCTAATCGCCCTCAAATCATCCAAAACATTGCTCGAGCTTGCCAAGATTACGGCTTCTTTCAGGTCGTAAATCATGGTGTTCCTGAGACTGTGGTTGATGAGATGATGAAGGTTTCAAGGGAATTTTTCCGGTTACCGGAGAGTGAGAGGTTGAAGAGTTACTCAGATGATCCTATGAAGACAACGAGGCTGTCCACTAGTTTCAATGTCAAAACTGAGAAAGTTGCTAACTGGAGGGATTTCTTGAGACTCCATTGCCATCCTATTCAGGATTACATCCATGAATGGCCTATCAATCCTCCATCTTTCAGGGAAGATGTTGGCGAGTATTGCAGAAAAGTGAGAGAATTAGCATTGGAGTTGCTGGAAGCCATATCAGAAAGCTTAGGTTTAGAGAGAGATTACATAGACAAGGCACTGGGGAAGCATGGACAGCACCTGGCAATAAACTATTACCCAGCTTGCCCGCAACCAGAGTTGACGTACGGGTTACCTGGCCATGCTGACCCTAATGTCATTACCATTCTGCTGCAAGATGACGTGGCAGGCTTGCAGGTGCTCAAAGATGGCAAATGGGTTGCTGTCAATCCCATCCCAAACACCTTCACCGTCAATATTGGAGACCAAATAcagATAATAAGCAATGACAAATACAAGAGCGTGTTGCACCGAGCTATGGTGAACagtgagaaagagagaatgtCAATTCCAACGTTCTATTGTCCATCGCCAGATGCAGTGATAGGACCTGCTCCTCAGCTGATAGACAATAATCATCCTCCACTTTACAACAATTTTGCTTACAGTGAATACTACAAGAAGTTCTGGAACAGGGGACTCTCCAAAGAAACCTGCGTCGACATGTTTAAGACTGATCAATTATCTCAACATCCTATTGCTAGCTA 1088 0.4494 MGSTSATTKPLLLSDLASSTVRLSHVPSNFIRPLGDRPNLQEVQSSDAVSISLIDLRGLRGPNRPQIIQNIARACQDYGFFQVVNHGVPETVVDEMMKVSREFFRLPESERLKSYSDDPMKTTRLSTSFNVKTEKVANWRDFLRLHCHPIQDYIHEWPINPPSFREDVGEYCRKVRELALELLEAISESLGLERDYIDKALGKHGQHLAINYYPACPQPELTYGLPGHADPNVITILLQDDVAGLQVLKDGKWVAVNPIPNTFTVNIGDQIQIISNDKYKSVLHRAMVNSEKERMSIPTFYCPSPDAVIGPAPQLIDNNHPPLYNNFAYSEYYKKFWNRGLSKETCVDMFKTDQLSQHPIAS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01996 362 Gene3D - 13 340 IPR027443 -
Bva08g01996 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 157 IPR026992 -
Bva08g01996 362 PRINTS Isopenicillin N synthase signature 291 309 - -
Bva08g01996 362 PRINTS Isopenicillin N synthase signature 71 88 - -
Bva08g01996 362 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 9 346 - -
Bva08g01996 362 SUPERFAMILY Clavaminate synthase-like 22 341 - -
Bva08g01996 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 303 IPR005123 -
Bva08g01996 362 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 9 346 - -
Bva08g01996 362 Pfam 2OG-Fe(II) oxygenase superfamily 206 303 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01996 Bva-Chr8 13376723 13378408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01996 21 351 Glycosyltransferase AT5G59530 31.268 9.19e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01996 K24028 - gmx:100788012 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01996 08 13376723 13378408 Bva08g01996 08 13376723 13378408 ECH
Bva02g02123 02 21805859 21808550 Bva08g01996 08 13376723 13378408 ECH