Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01887 ATGGCAGCGGCAGCAGCATCGTCTTCCATGGCAGCAGCCACTAACTTAATCCCAAGGATTCCCACCAGAACCGGCATAGCTCGCTGCTCTGCTTTGCCTTATCTCCCACCTCGCTTGTCCACCCCTTCCTTCCCAATTTCCTTGAAACCCTTTTCAGAGTCCCGAAAATCTTTCCTGCTTCAGACGAGAGCTTCTTCTTCAGATGAATCATCTTCTGTAGACGCTAATGAGTTGTTGACagatttgaaggaaaaaTGGGATGCTGTTGAAAACAAATCCACGGTACTTGTTTATGGCGGTGGGGCTGTAGTTGCTGTTTGGCTCTCTTCAATTATTGTGGGTGCCATCAACTCTGTCCCCTTGCTCCCCAAGATTTTTGAGTTGGTCGGACTAGGCTACACGGGATGGTTTGTGTACCGGTACCTTCTCTTTAAGTCAAGCAGAAAGGAACTAGCTGAAGACATTGAGGAAATCAAGAAAAAGGTTACCGGAACTGAGTATTA 503 0.4632 MAAAAASSSMAAATNLIPRIPTRTGIARCSALPYLPPRLSTPSFPISLKPFSESRKSFLLQTRASSSDESSSVDANELLTDLKEKWDAVENKSTVLVYGGGAVVAVWLSSIIVGAINSVPLLPKIFELVGLGYTGWFVYRYLLFKSSRKELAEDIEEIKKKVTGTEY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01887 167 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 4 166 - -
Bva08g01887 167 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 81 164 IPR025564 -
Bva08g01887 167 PANTHER - 4 166 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01887 Bva-Chr8 12702600 12705353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01887 - - tcc:18614036 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01887 08 12702600 12705353 Bva08g01887 08 12702600 12705353 ECH
Bva02g01989 02 21033049 21035898 Bva08g01887 08 12702600 12705353 ECH