Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01519 ATGTCCAGCTTCACTCACACCACCACACTCCTCCATGCCCATTTCAAAACCAAGAAGCAAAAGAGCTCTAACGTTAATCCTTCATCCCCAGACCAATCATCTTGTGGTGAACAAAATGTAACCAACAGAAGAAAACTGGTGTCAACATTTCTGGCCACTTCAATGGCTGCTCTGGGAGTGCAGGGCAGGCAGAGCCCGCCGGCACTGGCCCAGAATTGGGGCACACGTTCGTTTCTCCTGGAACATTTCTTCGAGCCCGGGTTGTCGCCGGAAGACGCCGTGGCTAGAATCAAGCAAACTGCTGAAGGACTACATAGTATTAGGGACATGTTGGAGACTATGTCTTGGAGGTATGTCATTTTCTACATTCGTTTAAAGCAGGCTTATCTTGATCAAGATTTGAAGAATGCTTTGACCACATTGCCCCAAAATCGCCGCAAGGAGTACGTTAAAACTGCCAATGAATTGGTAGACAACATGGCTGAGTTTGATCGTTATGTTCGGTCGCCCAAGGTGTACGAATCATATCTATACTATGAGAGGACTTTGAAATCAATAGATGCTCTTGTGGCTATGCTAGCTTA 584 0.464 MSSFTHTTTLLHAHFKTKKQKSSNVNPSSPDQSSCGEQNVTNRRKLVSTFLATSMAALGVQGRQSPPALAQNWGTRSFLLEHFFEPGLSPEDAVARIKQTAEGLHSIRDMLETMSWRYVIFYIRLKQAYLDQDLKNALTTLPQNRRKEYVKTANELVDNMAEFDRYVRSPKVYESYLYYERTLKSIDALVAMLA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01519 194 SUPERFAMILY Oxygen-evolving enhancer protein 3, 83 194 IPR023222 -
Bva08g01519 194 MobiDBLite consensus disorder prediction 15 39 - -
Bva08g01519 194 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 194 - -
Bva08g01519 194 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 67 194 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Bva08g01519 194 MobiDBLite consensus disorder prediction 20 39 - -
Bva08g01519 194 Gene3D - 57 194 IPR023222 -
Bva08g01519 194 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 194 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01519 K08901 - gmx:100807480 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01519 08 7997382 7998176 Bva08g01519 08 7997382 7998176 ECH