Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01500 ATGattgtcaaaatgaagaaatggtATTGTGGAATTCTGATTGCTtccttttttatgttatttatgcTGCTGATCCTGAGATATGGGGTCATGAAAAAGTCTGTTAGTGAAGGTTACCTGAATATACCTGTCTCCCTTAATGGTACTAATCCTCTTGAATGGATAAATCCTCTGGTTCCACCTGCTGTTCAAAATCCAGAGAAGAGTTCTCAAGTGATTTCTGCTGCTATTGTAGTATCTAGCCTCTTTTCCAGGACAAATTTCTCCAAGGAAGAGCAACAAGCTCTGCAGACGTGGAACcatttaaaacatttactTGATCATGGTCAGGGTTTACCTAATGCAGCAGATGCTATCAAGGAAGCCTCAGGTGCATGGAATAATCTTATGTCTTCAGTTGAAGAACAAAGACAGGGTTCTGCAAATGACAGTTCAAATGagagaaataaagagaaacaatGCCCacattttcttgataaaatgAATTCCACAGAATTTGGTAATAGTAGTTACAAATTGCGCGTTCCTTGTGGCCTAACACAGGGATCTTCCATCAGCATCATTGGCATTCCAAATGGTTTTCTTGGCAATTTTAGGATTGACTTGACTGGAGAACCACTCCCTGGGGAGCCGGATCCACCAATTATTTTGCACTATAATGTTAGGCTTCATGGTGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACCTGGACATTAGCTCATGACTGGGGTGAAGAGGAGCGTTGTCCATCCCCTACCCCTGAAAAGATTAAGAAAGTTGATGAGCTAGAGCAGTGCAATAAGATGGTAGGGAAGAATAATAGCCAAATTTCCATGGTTGGCAGCACATCAAGGCGATTTTCAGTGACAGAAGAACAATccagaaatagaaaatactTTCCTTTTAAGCAAGGTTATCCGTTTGTTGCAACTCTTAGAGTGGGATCAGAGGGACTCCAGATGACAGTTGATGGCAAGCACATATCATCATTTGCTTTCCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGATCAGAATTTCTGGGGATGTCAAGTTAATTTCTCTTCTAGCCAGCAGTTTACCTACATCAGAAGATTCAGAGCATATTATTGATCTAGAATCATTGAAATCAAAACCTATGGCTGTTCACAGCTCATTAGATCTCTTCATTGGTGTTTTCTCCACAGCTAACAATTTTAAGCGCAGAATGGCTGTTAGAAGAACATGGATGCAGTATAATGCAGTTCGATCAGACCAAGTTGCAGTGCGATTCTTTGTTGGTTTGCACAAAAGCCAAGTAGTTAATGAAGAACTTTGGAAAGAAGCACAGACCTATAGAGACATACAATTGATGCCATTTGTTGACTACTACAGCCTCATCACCTGGAAAACTTTAGCAATCTGCATATATGGGACGGAGGTTGTTTCAGCAAAGTTTGTCATGAAAACAGATGATGATGCATTTGTTCGTGTGGATGAAGTACTATCTTCCTTGCATAGAATCAATGTGAGTCATGGATTGCTTTATGGACTCATCAATTCAGATTCCCGACCTCACCGAAATTCTGACAGCAAATGGTTTATCAGCCCTGAGGAATGGCGGGATGAAACTTATCCCCCTTGGGCACATGGTCCTGGCTATGTGGTCTCCAATGATGTAGCGAGGACTGTGTACAGAAAATATAGAGAAGGCAAGTTGAAGATGTTTAAGTTAGAAGATGTGGCGATGGGAATCTGGATTGCGGACATGAAGAAGGAAGGTCTAGAAGTGCATtatcagaaagaagaaagagtcTACAACGAGGGTTGCAAGGATGATTATGTGGTCGCACATTACCAAGGTCCTAGAGAGATGCTCTGTTTGTGGCAGAAACTTGAGGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAGAAGATA 1928 0.3916 MIVKMKKWYCGILIASFFMLFMLLILRYGVMKKSVSEGYLNIPVSLNGTNPLEWINPLVPPAVQNPEKSSQVISAAIVVSSLFSRTNFSKEEQQALQTWNHLKHLLDHGQGLPNAADAIKEASGAWNNLMSSVEEQRQGSANDSSNERNKEKQCPHFLDKMNSTEFGNSSYKLRVPCGLTQGSSISIIGIPNGFLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTLAHDWGEEERCPSPTPEKIKKVDELEQCNKMVGKNNSQISMVGSTSRRFSVTEEQSRNRKYFPFKQGYPFVATLRVGSEGLQMTVDGKHISSFAFRETLEPWLVSEIRISGDVKLISLLASSLPTSEDSEHIIDLESLKSKPMAVHSSLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSDQVAVRFFVGLHKSQVVNEELWKEAQTYRDIQLMPFVDYYSLITWKTLAICIYGTEVVSAKFVMKTDDDAFVRVDEVLSSLHRINVSHGLLYGLINSDSRPHRNSDSKWFISPEEWRDETYPPWAHGPGYVVSNDVARTVYRKYREGKLKMFKLEDVAMGIWIADMKKEGLEVHYQKEERVYNEGCKDDYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRRR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01500 642 PANTHER - 69 630 - -
Bva08g01500 642 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 69 630 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva08g01500 642 Pfam Galactoside-binding lectin 171 359 IPR001079 GO:0030246
Bva08g01500 642 Gene3D - 380 621 - -
Bva08g01500 642 Gene3D - 167 359 - -
Bva08g01500 642 CDD GLECT 171 358 IPR001079 GO:0030246
Bva08g01500 642 Pfam Galactosyltransferase 403 587 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva08g01500 642 SMART Gal_bind_lectin_2 175 360 IPR001079 GO:0030246
Bva08g01500 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 171 360 IPR013320 -
Bva08g01500 642 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 171 361 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01500 Bva-Chr8 7888352 7894099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01500 5 637 Glycosyltransferase AT1G26810 61.838 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01500 K14413 - gmx:100782548 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01500 08 7888352 7894099 Bva08g01500 08 7888352 7894099 ECH