Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01464 ATGAATCCTGGTGGATATACTGTTGAAGTCACGAGTCTTTCACCCAAAGCCACAGAGAAGGACGTCTATGACTTTTTTGCTTTCTCCGGAGCAATTGAACACGTGGAAATTGTCAGATCTGGTGATTATGCATCCACTGCTTATGTGACATTCAAAGATGCCCATTCTCTAGAAACTGCCTGCTTGCTCAGTGTTGCCACTATTTTAGATCAACGTGTATGCATAACACGCTGGGGGCAATATGAAGATGAGCAAGATTTTTGGAACAGGCCAGCATATAGTCACTGGGAGGAAACGGGTTCAACTCAACCACAAAACAGCAATTTTGTGTCTTCTGCTGGAGAAGCAGTCACCGTGGCTCAAGAAGTTGTCAAGACAATGCTAGCAAAGGGATATGTTTTGAGTAAGGATGCATTAGCTAAGGCTAAAGACTTCGACGAGTCTCATCAAGTTTCAGCGACTGCAACAGCTAAGGTTGCTGAGCTTAGCCAGAGAATTGGCCTCTCTGAAAAGTTTTCTGCAGGTTTTGAAGCTGCTAGATCTGTGGATCAGAGGTATCAAGTCTCAGAAACGGCCAAGTCAGCGGCATCAGCCACTGGAAGGTCAGTTGCAGCAGCTGCCAACACCGTGGTAAATAGTAGCTATTTTTCAAAGGGAGCCTTGTGGGTGTCAGGTGCTTTATCACGGGCAGCACAAGCTGCTGCCGATTTGGGTGCCCGTGGTGGTGTTAGGCAGTG 737 0.4681 MNPGGYTVEVTSLSPKATEKDVYDFFAFSGAIEHVEIVRSGDYASTAYVTFKDAHSLETACLLSVATILDQRVCITRWGQYEDEQDFWNRPAYSHWEETGSTQPQNSNFVSSAGEAVTVAQEVVKTMLAKGYVLSKDALAKAKDFDESHQVSATATAKVAELSQRIGLSEKFSAGFEAARSVDQRYQVSETAKSAASATGRSVAAAANTVVNSSYFSKGALWVSGALSRAAQAAADLGARGGVRQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01464 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 60 IPR000504 GO:0003723
Bva08g01464 245 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 241 - -
Bva08g01464 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 60 IPR000504 GO:0003723
Bva08g01464 245 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Bva08g01464 245 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 241 - -
Bva08g01464 245 CDD RRM_Vip1_like 8 76 IPR034360 -
Bva08g01464 245 Gene3D - 1 86 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01464 Bva-Chr8 7691036 7694115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01464 - - gmx:100805907 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01464 08 7691036 7694115 Bva08g01464 08 7691036 7694115 ECH