Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01451 ATGGCGCAAGAGCAAGTGGTCAGAGAAAGCGACAAACTTTCAAGCTGTGATACCTATTTTGAGACCATCCAATCTAGAAAGAAACTACCGAAAGCATTTCAAGAGTCATTGACAGATGCATTTGCAAAGATCCCTGTATCTTCTTTTCCAGGAGTTCCTGGAGGACAAATTGTTGAAATTCCAGCAGACACAACTATTGGCGAAGCACTTGAGATTCTATCCGAATGCAACATATTAGCTGCTCCTGTTAAAGACCCAGATGCAGGAACTAGTTTAAATTGGAGAGACAGGTACCTTGGCGTCATAGATTATTCATCTATCGTTCTTTGGGTGCTGGAAATTGCAGAACTTGCAGCGGCTGCCATATCAACAAGCACAGCAACAGCTGCAGGAATTGGTGCAGGAACTGCTGGTGCTCTGGGAGCTCTGGCATTGGGAGTGACAGGTCCTGTCGCAGTTGCTGGTCTAACTGCTGCTGCTGCAGTAGGCGCTGCAGTGGCAGGCGGTGTTGCTGCAGATAAGGTGGCGGGTAAGGATGCTCCTGCAGCTGCTGACAGACTGGGCGAGAACTTCTACAAAGTTATACTGCAAGAAGAACCCTTCAAATCAACAACGGTGCgatcaataattaaatcatatcGATGGGCTCCTTTCGTTCCAGTTGCAACAGATAGCACCATGTTGACCGTCTTGCTGCTTCTCTCAAAATATAGGCTGAGAAACGTACCTGTCATTGAACCAGGGAAGCCTGACATTAAGAACTTTATTACTCAGTCTGCAGTAGTTCAAGGTCTTGAAAGATGCAAAGGAAGAGATTGGTTTGACCTCATTGCGGCAAGTCCTATATCAGAGCTGGGACTCCCCTTTATGTCTCCTCATGAGATTATTAGCATCCAGAAAGATGAATTGGTTCTTGAAGCCTTCAAGCGAATGAAAGATAATCAAATTGGTGGTCTTCCTGTAGTAgagggaccaaggaagagaattGTTGGGAACTTAAGCATTGGAGATATCAGACACTTGCTGCTAAGGCCTGAGCTTTTCTCCAATTTCAGGAAGCTCACTGTGACGGATTTCATGAATACCATTGTCACGGCAACCCGACAAATTGGAAAAGTTACTCAACCCATAACATGCAAGCCTAACTCAACTCTGGGAGATGTAATCCACACTCTTGCTTCTCAGTCTGTCCACAGGATTTatacaattaatgaaaatgatgaagtaGTCGGAGTCATTACACTGAGAGATGTGATCTCTTGTTTCATCACTGAACCTTCTTACCACTTCGACGATTACTTTGGCTTTGCTGTTAAAGAGATGTTGAGTCAGtg 1334 0.4303 MAQEQVVRESDKLSSCDTYFETIQSRKKLPKAFQESLTDAFAKIPVSSFPGVPGGQIVEIPADTTIGEALEILSECNILAAPVKDPDAGTSLNWRDRYLGVIDYSSIVLWVLEIAELAAAAISTSTATAAGIGAGTAGALGALALGVTGPVAVAGLTAAAAVGAAVAGGVAADKVAGKDAPAAADRLGENFYKVILQEEPFKSTTVRSIIKSYRWAPFVPVATDSTMLTVLLLLSKYRLRNVPVIEPGKPDIKNFITQSAVVQGLERCKGRDWFDLIAASPISELGLPFMSPHEIISIQKDELVLEAFKRMKDNQIGGLPVVEGPRKRIVGNLSIGDIRHLLLRPELFSNFRKLTVTDFMNTIVTATRQIGKVTQPITCKPNSTLGDVIHTLASQSVHRIYTINENDEVVGVITLRDVISCFITEPSYHFDDYFGFAVKEMLSQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01451 444 Gene3D - 52 269 IPR046342 -
Bva08g01451 444 SUPERFAMILY CBS-domain pair 283 431 IPR046342 -
Bva08g01451 444 PANTHER BNAANNG38820D PROTEIN 9 443 - -
Bva08g01451 444 SUPERFAMILY CBS-domain pair 37 262 IPR046342 -
Bva08g01451 444 Gene3D - 275 425 IPR046342 -
Bva08g01451 444 ProSiteProfiles CBS domain profile. 372 432 IPR000644 -
Bva08g01451 444 SMART cbs_1 217 266 IPR000644 -
Bva08g01451 444 SMART cbs_1 375 423 IPR000644 -
Bva08g01451 444 SMART cbs_1 294 343 IPR000644 -
Bva08g01451 444 SMART cbs_1 56 112 IPR000644 -
Bva08g01451 444 CDD CBS_pair_SF 217 338 - -
Bva08g01451 444 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Bva08g01451 444 CDD CBS_pair_SF 293 419 - -
Bva08g01451 444 ProSiteProfiles CBS domain profile. 290 349 IPR000644 -
Bva08g01451 444 Pfam CBS domain 358 420 IPR000644 -
Bva08g01451 444 Pfam CBS domain 290 343 IPR000644 -
Bva08g01451 444 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 9 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01451 Bva-Chr8 7596650 7601930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01451 - - gmx:100800376 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01451 08 7596650 7601930 Bva08g01451 08 7596650 7601930 ECH