Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01441 ATGTCGACCGTTAACTTAGAGCCACTCTTCCACATCTGTCGCGGAGAAATTCCAGTTCTTCGTGCTAAACCGAAGGCACTACTCAATTTCAAGCCTTGCTTCGTGAATTGCTCTTCCAAGCTATTCGTTCCCAATGTTAGGAGCTTCTGCAACTTTAGATCACCCCATATTAACAGGTCTACTGCTGTTGCATCTGCCTCTACAGATGCAGCTGCCTTGGATTCCTTCCAGTCCAGTCTTGATGTCTTATTCCGCAAGACTTTCCCAGTTAACCGAACTGAAAAGGTAGAGGGAAAGATATCTGTAAGATTAGATCACGGGAAGGATTCGAGCAATTGGGAGCTCACGGTAGGCTGCAATCTTACCGGGAAATGGATTCTTCACTGGGGAGTTTCCCATGTCGATGATACTGGAAGCGAATGGGATCAACCTCCTCGTGATATGATACCCCCTGAATCAATTCTTATAAAGGACTACGCAGTAGAGACACCCTTGAAGAAATCATCAACATCTGCTGAAGGGGATACTTTCTATGAAGTCAGGATTGATCTTAAACCTGACAGCAAAATAGTGGCGATTAATTTTGTTCTGAAGGATGAGGAAACTGGAGCTTGGTATCAACACAAAGGACGAGATTTCAAGGTGCCACTGCTGGACTGCATTCGGGAGGAAGCTAATGTAATCAGACCAAAAAGGGGCTTTAGCATATTGCCAgGGCCATTGGGGGGGCTATCTAACATACTCCTCAAATTGGAAGCAACAGATAATGAAGGACAAGATAATAGCATGCTATCCAAAGattttaaacaagaaaatagtcAACTAGAAGGTTTCTATGTAGAACTACCGATTACAAAAGAGGTTTCAGTCAATAACTCTGTCAGTGTCTCCATTCAGAAGTGCCCTGAGACTGCTAAGAATCTTTTATACTTGGAAATGGATCTATGTGGAGATATTGTCCTTCACTGGGGAGTTTGCAGAGATGATTCTAGAAGATGGGAGATACCCCCCGCACCTCATCCGCCAGAAACAGTGGCATTCAAAAAAAGGGCTTTGAGAACTCGATTACAGCCAAGAGAGAGTGGAAATGGATGTTCAGTATCTATCACTctggaagaaaaattttcaggatttctttttgttttcaaactaGATGAAAACTCTTGGATTAATGACAAGGGGAACGATTTCTATATCCCTCTCCCAAGTTCTAGTAGCTTACACACCAAAACCAAAGATGATCAATTGAAAGATGTGCAAAGTACGGAGACTGAAGAAGCAAGAGAAGAGGCCTCTGTACCATCATTTACTGATGGAATAATCAATGAAATAAGGAGCTTGGTAACAGACATTTCCTCAGAGAAGAGTCGAAAGACAAAAACCAAAGAAGCACAAGAAAGCATTCttcaagaaatagaaaaactaGCTGCCGAAGCCTATAGTATCTTCAGAAGCTCTGTTCCCACTTTATCAGAGGAAACTATTGTGGAACCTGAGATTTTTGTGGAATCTGAGACACTGAAGTTATCTCCGAAAATAACATCTGGGACAGGTACAGGATTTGAAATATTACTCCAGGGTTTTAACTGGGAATCACATAAATCTGGAAGATGGTACATGGAACTGAAAGAGAAAGCTTCGAAACTAGCATCGCTTGGTTTCACTGTGATTTGGTTACCGCCACCTACTGAGTCCGTTTCACCTGAAGGGTACATGCCAAAGGATTTATATAATCTAAATTCGAGATATGGAAATATTGATGAACTGAAGGACGTGGTGAAAAGCTTTCATGAAGTTGGGATCAGAACTCTCGGAGATGCTGTGTTAAATCACCGTTGTGCTCATTATAAGAATCAGAATGGTGTTTGGAACATATTTGGCGGTCGTCTTAACTGGGATGACCATGCAATTGTTTCTGATGATCCACATTTTCAGGGTAGGGGCAACAAGAGCAGTGGGGATAATTTCCATGCTGCTCCAAACATTGATCATTCACAGGAATTCGTTAGGAAAGATCTCAAAGAATGGTTATTCTGGTTGAGGGAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTTAAGGACTACCTGGATGCAAGTGAACCTTACTTTGCTGTAGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAATGGAGCATAACCAGGATGCTCATAGGCAGAGGATCATTGATTGGATCAATGCAACTAATGGTACTGCTGGTGCTTTTGATGTCACAACGAAAGGGATTCTTCACTCTGCATTGGAAAGATGTGAATACTGGCGATTATCAGATCCGAAGGGAAAGCCTCCAGGTGTTGTTGGATGGTGGCCGTCTCGTGCTGTTACCTTCATAGAAAATCATGACACTGGTTCTACCCAGGGTCATTGGAGGTTTCCCAGCGGAAAAGAAATGCAAGGATATGCTTACATTCTTACTCACCCAGGAACACCATCAGTGTTCTATGACCACCTTTTCTCTCATTATCAAGCCGAAATTGCAGCACTCATCTCTCTGAGAAAACGGAAGAATATCCACTGCAGGAGTGAAGTTGAAATCAAGAAGGCAGAAAGGGATGTCTATGCAGCCATCATTGATGAAAAGGTTGCTATGAAGATAGGACCTGGTCATTTTGAAACCCCAAGTGGATCCCAAAATTGGTCCTCTGTTATTGAAGGAAGAGACTACAAGATTTGGGAGGCATCGTA 2741 0.4163 MSTVNLEPLFHICRGEIPVLRAKPKALLNFKPCFVNCSSKLFVPNVRSFCNFRSPHINRSTAVASASTDAAALDSFQSSLDVLFRKTFPVNRTEKVEGKISVRLDHGKDSSNWELTVGCNLTGKWILHWGVSHVDDTGSEWDQPPRDMIPPESILIKDYAVETPLKKSSTSAEGDTFYEVRIDLKPDSKIVAINFVLKDEETGAWYQHKGRDFKVPLLDCIREEANVIRPKRGFSILPGPLGGLSNILLKLEATDNEGQDNSMLSKDFKQENSQLEGFYVELPITKEVSVNNSVSVSIQKCPETAKNLLYLEMDLCGDIVLHWGVCRDDSRRWEIPPAPHPPETVAFKKRALRTRLQPRESGNGCSVSITLEEKFSGFLFVFKLDENSWINDKGNDFYIPLPSSSSLHTKTKDDQLKDVQSTETEEAREEASVPSFTDGIINEIRSLVTDISSEKSRKTKTKEAQESILQEIEKLAAEAYSIFRSSVPTLSEETIVEPEIFVESETLKLSPKITSGTGTGFEILLQGFNWESHKSGRWYMELKEKASKLASLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDVVKSFHEVGIRTLGDAVLNHRCAHYKNQNGVWNIFGGRLNWDDHAIVSDDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLFWLREEIGYDGWRLDFVRGFWGGYVKDYLDASEPYFAVGEYWDSLSYTYGEMEHNQDAHRQRIIDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDPKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPSVFYDHLFSHYQAEIAALISLRKRKNIHCRSEVEIKKAERDVYAAIIDEKVAMKIGPGHFETPSGSQNWSSVIEGRDYKIWEAS 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01441 913 CDD AmyAc_arch_bac_plant_AmyA 523 862 - -
Bva08g01441 913 Pfam Alpha amylase, catalytic domain 549 831 IPR006047 GO:0005975
Bva08g01441 913 SMART aamy 522 851 IPR006047 GO:0005975
Bva08g01441 913 Gene3D Glycosidases 522 855 - -
Bva08g01441 913 SUPERFAMILY Glycosyl hydrolase domain 856 911 - -
Bva08g01441 913 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 85 913 - -
Bva08g01441 913 MobiDBLite consensus disorder prediction 409 433 - -
Bva08g01441 913 Pfam Alpha-amylase C-terminal beta-sheet domain 853 911 IPR012850 GO:0004556|GO:0005509|GO:0005975
Bva08g01441 913 MobiDBLite consensus disorder prediction 410 432 - -
Bva08g01441 913 SUPERFAMILY (Trans)glycosidases 523 839 IPR017853 -
Bva08g01441 913 PANTHER ALPHA-AMYLASE 85 913 - -
Bva08g01441 913 Gene3D - 856 912 IPR013780 -
Bva08g01441 913 SMART alpha-amyl_c2 852 912 IPR012850 GO:0004556|GO:0005509|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01441 Bva-Chr8 7555657 7564078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01441 1 913 Glycoside Hydrolase AT1G69830 65.194 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01441 K01176 - gmx:100788193 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01441 08 7555657 7564078 Bva08g01441 08 7555657 7564078 ECH