Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01428 ATGCTTTCCCTTAATGCTTCCTCggtttactttgttttttctcaatACTCCTCAGCGGAGCTGAACCCCCAGTTATTTCcctccattttctttattgttggTTCTAGAAGACGGAGGAGGCGGCAACAGTTTGCGTCTCTGAATCTTGTTGCAGTTAAGGAGACTGATTTGCTGTTTGGGTACTGGGATTCTCTCAAGAAAGGGAATTCTTACCAGAGTTTATATTCGGGCAGCTCTGGATCCCTGAGGAGGTGTAAAGATTTGGATGGCGAGGGAGACTTCTCTCTGGAAGCGGAGATTTTGGAGTTCATGAAGAATTCGAAGAAACCGGAAGCGTTTCCTACCAAAAGAGAGTTGGTTGCTGCTGGAAGGATGGATTTGGTGGACGCTATTATTAAGAAAGGAGGTTGGCTTTCCCTAGGGTGGGATTTGGATGAAGAGGCGGAAGAAGGGCTTGGACAAATGAGTGTCAAAAGtaaggaaaatgaaattcagGGTCCTGCGGCtgctgtttcttcttcttcttcagctgACTGTTCTCAACCAGCTAAGTCTTCCGATAGATCAATagAACTAAAAGTTGAGGAGTCTGGCATTGAGGGCATATTGAATAGActggaaaaagagagaaataattcTCTTGGACTTGGGTTCAGAGATGATAAGAACGAATGGCAATATAGAACCACAGCAGATGCgACAGTAGCTGACCCTGAAAAAAGTAGCATACCAGCCTTCCTAAGCCCCCGAACCAGTCCTCTTAGTGGTTTTCAGAGGAAAATTGGTCAAGACAGATCTCTTTCAGGCATTGATGGTTCAAGAAACTCACTTAAGCCAGAGACATGGAGAAGTTGGATCGCTCAGAGGGCTGGCGATTCAGATATAGATTTTGAAGATGCTGAAATTGCTCCCACTGAAACTGGAAAAGAAGGTGCAACCGGTGTTTCTGGAAAAGATGTATTTGAGGTAAGAAACTTTActggagaaaaagaattagatCTTTCCAACGGAAAGGTAAATCACAGTGAAATAAACAGCCGAATTCTGGAGCTGGATTCAGAGCTGTTCTCTCTTCTTCGCTCATTGAGGTCTAGAGATGATGAAGTTGCAATAAACATGGACCAGGAAGGCTCCCCTGATGATCTACAAAACTGTTCGGATACTTGGGAATTCCAGGAAAATGAGATCATGAAAGCTAACGACAGGCTTCGTTCAATACGTGCCAAGTTGGCAGTATTGGAAGGAAAAATGGCACTAGCAATAATTGATGCACAAAAGATAGTAGAagagaagcagaagaagatTGAACATTCTCATAGAGCTATACAACTTATTCGTGATACTCGTATAATTTGGCCTAACACGGCTTCAGAGGTGCTTTTAGCAGGATCATTTGACGGTTGGTCCAGTCAGAGAAGGATGGAGAAGTCAGACACGGGTATCTTTTCTCTGTCCCTGAAGTTGTATCCTGGAAGTTATGAGATTAAGTTCATCGTTGATGGGGAATGGAGGATTGATCCCTTGCGCCCTATTGTTCAAAACAACGGTTACGTGAATAATCTTCTCGTTGTCCATTG 1577 0.4001 MLSLNASSVYFVFSQYSSAELNPQLFPSIFFIVGSRRRRRRQQFASLNLVAVKETDLLFGYWDSLKKGNSYQSLYSGSSGSLRRCKDLDGEGDFSLEAEILEFMKNSKKPEAFPTKRELVAAGRMDLVDAIIKKGGWLSLGWDLDEEAEEGLGQMSVKSKENEIQGPAAAVSSSSSADCSQPAKSSDRSIELKVEESGIEGILNRLEKERNNSLGLGFRDDKNEWQYRTTADATVADPEKSSIPAFLSPRTSPLSGFQRKIGQDRSLSGIDGSRNSLKPETWRSWIAQRAGDSDIDFEDAEIAPTETGKEGATGVSGKDVFEVRNFTGEKELDLSNGKVNHSEINSRILELDSELFSLLRSLRSRDDEVAINMDQEGSPDDLQNCSDTWEFQENEIMKANDRLRSIRAKLAVLEGKMALAIIDAQKIVEEKQKKIEHSHRAIQLIRDTRIIWPNTASEVLLAGSFDGWSSQRRMEKSDTGIFSLSLKLYPGSYEIKFIVDGEWRIDPLRPIVQNNGYVNNLLVVH 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01428 525 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 1 525 - -
Bva08g01428 525 SUPERFAMILY E set domains 448 524 IPR014756 -
Bva08g01428 525 Gene3D Immunoglobulins 444 525 IPR013783 -
Bva08g01428 525 MobiDBLite consensus disorder prediction 159 187 - -
Bva08g01428 525 CDD E_set_AMPKbeta_like_N 448 524 - -
Bva08g01428 525 Coils Coil 396 416 - -
Bva08g01428 525 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 1 525 - -
Bva08g01428 525 Pfam Glycogen recognition site of AMP-activated protein kinase 447 525 IPR032640 -
Bva08g01428 525 MobiDBLite consensus disorder prediction 159 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01428 Bva-Chr8 7478352 7482863 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01428 - - zju:107428805 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01428 08 7478352 7482863 Bva08g01428 08 7478352 7482863 ECH