Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01425 ATGGATCCTCCTTCTTCTTTGCCAGCGTCTCTGCACCTGGCAATGGCTGCTTTAGTCGGAGCCTCTCTGATGGCACTCTCCGCCTTTTACATCCACAAACGCAGCGTCGACCAGGTGCTCCATCGACTTATCGAGATCCGCCGTGAGCCGTCCCGCGGTTCTGGAGGCCGTGATGAATTGAAAGGTGAAGAGGAGCAGTACGACGACGAGGACGATGACGACGATGACCTGAGAGGGCTCAGTTCTTACGGAGATGCTAGAATCTTATCGAAGTCCGTGGACGAAAACCTCCTCAGAAGTTATAGAATTTCGTCTTCGTTGCCGAACGTGGCTTCGAGGACTGGCTGGTTTGATGAGGACCCCAAATTTGATCAATCAGTGGGTTATGCGGCTCAGGGTCGATCTTCCTCGCTGGAGAATCTCCAATTCGTTCCCTCAGGACTTCCTCCTCTTCGAACGGATCGAAGGGATGGAGAAAGTGCTCAGCTTTCATCTTCTTATAAAAGAATAGGGTCTGTTGGTAGAATCATGACTCCAAGATCGCCGAGTGTTGCTGAGGATTCTGACGACGACGAGGGATCACTCCTTGCAAATGGGGATAGCATTCCTTTCTACCACGGGAATGTGCATCCTTCGAATAATTTTGCAGTAAATTCAAGCATTGGCAATTTATCTTCTGTTACGTCTAAAGGTGATGAGGAAAACTGTGCAAAAAGTAAGATGTATACAGAGATTTTGAACAAAGTGAAATCTAGTGCAGATTTGCACAGTGATGGAAAGACAGATTCAACTTCAGGACACTTGGTTGAGAAGGAGCTCCCATTTGTCAATAATACTTTACCTCCAAAAAACACGTTGCATGAATATACAAGCgtagaagaagaggaagtgTGCAAGATGATTCGTGAATGCTTAGATTTGCGAAAGAAATATGTTTACAGGGAAAATGTTTCTCCATGGAAGGTGGACATTGAGCCCAAACATACCTTAGTTAAGAACTCTGATCCATTTCACTTTGAACCAGTTGAAGCAACAGCACACCACTTTAGGATGGAAGATGGAGTCATACACGTTTATGCAAGTAAAAATGACACTGAGGAGCTCTTCCCTGTTGCTAGCTCAACAACATTTTTTACTGATATGCATTACATTCTCAAAGTTATGTCTATTGGGAATGTTCGCACTTCATGCCACCATAGGCTAAGATTTCTGGAGGAGAAATTCCGCCTTCATCTGTTACTAAATGCAGAGAGGGAGTTTCTGGCCCAAAAAAGTGCCCCACACCGAGATTTTTACAATATCAGAAAAGTTGATACTCATGTGCATCATTCTGCTTGTATGAATCAGAAGCATCTCCTGCGCTTCATCAagtcaaaactaagaaaagaaCCTGATGAGGTTGTTATCTTCAGAGATGGAAAGTATATGACACTAAAGGAGGTGTTTGAGAGCTTGGATTTGACAGGGTATGACATGAATGTTGATTTGTTGGACGTTCATGCAGATAAGAGTACATTCCATAGATTTGACAAATTCAACCTCAAGTATAATCCTTGTGGACAGAGTAGGCTGAGAGAGATATTCTTAAAGCAGGATAACCTTATCCAAGGAAGGTTTTTGGCGGAAGTAACAAAGCAAGTTTTGTTAGATCTTGAAGCAAGCAAATATCAGATGGCTGAGTACAGGATTTCCATTTATGGAAGGAAACAGAGTGAATGGGACCAGCTGGCAAGTTGGTTTGTTAATAATTCTCTTTACAGTGAGAATGCCGTATGGCTAATCCAGTTACCACGACTATACAATGTGTACAAGAATATGGGGATTGTTACCTCCTTTCAGAATATTTTGGATAATGTGTTTATTCCTCTGTTTGAAGTCACTGTAGATCCAAATTCTCATCCTCAGTTACATTTGTTCTTGAAGCAGGTGGTGGGATTTGATCTTGTAGATGACGAAAGTAAGCCAGAAAGGCATCCAACTAAGCACATGCCCACTCCAGCTGAGTGGACTAATGAATTTAACCCAGCATATTCTTACTACACTTATTACTGCTATGCAAACTTGTATACGCTCAATAAgCTTCGTGAATCAAAAGGAATGACCACAATAAAGTTGCGGCCTCATTGTGGAGAGGCAGGTGAGGTTGATCATTTGGCCGCTGCTTTCCTTCTGTGCCATAACATATCTCATGGGATTAATCTACGGAAGACTCCAGTTTtgcaatatttatattacctTGCACAGATTGGATTAGCTATGTCACCCCTTAGCAATAATTCCCTTTTCTTGGACTATCATCGCAATCCCCTGCCCATGTTTTTCCAGCGTGGTCTCAatgtctctctctctactgATGATCCGTTACAAATTCATTTGACAAAAGAACCATTGCTAGAAGAATATAGTGTTGCAGCGAAGGTATGGAAGCTGAGTGCCTGTGACCTATGTGAGATAGCTAGAAATTCTGTCTATCAATCTGGATTTTCTCATGAAGCCAAGGCGCACTGGCTAGGTGataaatatttcttgaaaGGTCCAGAAGGAAATGATATTCACAAGACAAATGTCCCCGACTTAAGGGTCTCTTTCCGAAATGAGACATGGAAAGAGGAAATGCAATATATTTACTCGGGTCAAGCCACCTTTCCTGAAGACGTTGACCCATG 2666 0.416 MDPPSSLPASLHLAMAALVGASLMALSAFYIHKRSVDQVLHRLIEIRREPSRGSGGRDELKGEEEQYDDEDDDDDDLRGLSSYGDARILSKSVDENLLRSYRISSSLPNVASRTGWFDEDPKFDQSVGYAAQGRSSSLENLQFVPSGLPPLRTDRRDGESAQLSSSYKRIGSVGRIMTPRSPSVAEDSDDDEGSLLANGDSIPFYHGNVHPSNNFAVNSSIGNLSSVTSKGDEENCAKSKMYTEILNKVKSSADLHSDGKTDSTSGHLVEKELPFVNNTLPPKNTLHEYTSVEEEEVCKMIRECLDLRKKYVYRENVSPWKVDIEPKHTLVKNSDPFHFEPVEATAHHFRMEDGVIHVYASKNDTEELFPVASSTTFFTDMHYILKVMSIGNVRTSCHHRLRFLEEKFRLHLLLNAEREFLAQKSAPHRDFYNIRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDMNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLLDLEASKYQMAEYRISIYGRKQSEWDQLASWFVNNSLYSENAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVTVDPNSHPQLHLFLKQVVGFDLVDDESKPERHPTKHMPTPAEWTNEFNPAYSYYTYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGEVDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDLCEIARNSVYQSGFSHEAKAHWLGDKYFLKGPEGNDIHKTNVPDLRVSFRNETWKEEMQYIYSGQATFPEDVDP 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01425 888 Gene3D - 347 871 - -
Bva08g01425 888 MobiDBLite consensus disorder prediction 50 81 - -
Bva08g01425 888 SUPERFAMILY Metallo-dependent hydrolases 283 874 IPR032466 -
Bva08g01425 888 MobiDBLite consensus disorder prediction 144 165 - -
Bva08g01425 888 PANTHER AMP DEAMINASE 10 887 - -
Bva08g01425 888 Pfam AMP deaminase 288 875 IPR006329 GO:0003876|GO:0032264
Bva08g01425 888 CDD AMPD 377 872 IPR006329 GO:0003876|GO:0032264
Bva08g01425 888 TIGRFAM AMP_deaminase: AMP deaminase 339 875 IPR006329 GO:0003876|GO:0032264
Bva08g01425 888 Gene3D - 447 537 - -
Bva08g01425 888 MobiDBLite consensus disorder prediction 63 78 - -
Bva08g01425 888 ProSitePatterns Adenosine and AMP deaminase signature. 781 787 IPR006650 GO:0009168|GO:0019239
Bva08g01425 888 PANTHER AMP DEAMINASE 10 887 IPR006329 GO:0003876|GO:0032264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01425 Bva-Chr8 7454998 7463011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01425 K01490 - gmx:100793831 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01425 08 7454998 7463011 Bva08g01425 08 7454998 7463011 ECH