Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01403 ATGGAGCTAAACCATGCTTCAACTCctcttctctccctttttctcttccttcttccttGTTTGGCATCTTGTCAAACTTGCCAGAGAATCTGTGGCAAGCAAATCCTCAAGTACCCATTTGGCAGTGACCCTGGTTGTGGCGATCCTCGCTTCCAACCCCATGTTTCCTGCAGCCAAGAAAGGGTAACCTTCACCACTCACACTGGTTCCTACCCAGTAACCTCAATTGACTATGCAAACCAAGTCATCTACATCTCAGATCCCACCATGTCAACATGTTCCTGCACTTTGCCCAGCAAAGGCTTTGGCTTGAACTGGGATGCACCCTTCACTTTTCATGACAGCACCGTCTTTGCCATATTGGATTGCTCAAACTCATCATCAATATGCATATCAAATGGATATGATGATGGAATCAATTCCAAGCTTCTCTGTGATCAAGGGACACCCATTTGCAGTCTCTTGTATTCTTGCAGGCCTATTAGCACTATCAATCTCCCAATCTCTACGTGCTGCGTTTACACGCCGGTTAATCTTGGACCAGCCTTTGAAATGGATCTGCAGAAGCTTCAGTGCTCTTCGTATTCTGGGTTTTACAGCTTTAATGCTCAGCAGTCTGATCCTGAGAAGTGGAACTATGGAATAGCACTCAAGTACAAGTTCAGTGTGACAAATGACTATCCTAGCAATTGTGTTAATTGTGAAAGAAGTAATGGAGTCTGTGGTTACAATCAAGCCCTCAATTCATTCATCTGCAACTGTCCCAATGGGATTAACACAACAGATTGTTTCTTCACATCAACTTATAACAATGGTTTCAGAACTGGTATGCAAAAttacccctttttttttctctggtCAATTGCAGATTATGTATATCATCTTTTAAAGTCTGATATTAAAATTGCTTTGCCTCTGTTTTCTATTCAGGAATTGCTTCTTGGTTG 947 0.3992 MELNHASTPLLSLFLFLLPCLASCQTCQRICGKQILKYPFGSDPGCGDPRFQPHVSCSQERVTFTTHTGSYPVTSIDYANQVIYISDPTMSTCSCTLPSKGFGLNWDAPFTFHDSTVFAILDCSNSSSICISNGYDDGINSKLLCDQGTPICSLLYSCRPISTINLPISTCCVYTPVNLGPAFEMDLQKLQCSSYSGFYSFNAQQSDPEKWNYGIALKYKFSVTNDYPSNCVNCERSNGVCGYNQALNSFICNCPNGINTTDCFFTSTYNNGFRTGMQNYPFFFLWSIADYVYHLLKSDIKIALPLFSIQELLLG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01403 315 Pfam Wall-associated receptor kinase galacturonan-binding 27 87 IPR025287 GO:0030247
Bva08g01403 315 Pfam Wall-associated receptor kinase C-terminal 204 256 IPR032872 -
Bva08g01403 315 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 10 278 - -
Bva08g01403 315 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 10 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01403 Bva-Chr8 7360553 7361500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01403 31 126 Receptor kinase-like Gene Family AT5G02070 27.723 8.18e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01403 - - vra:106777232 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01403 08 7360553 7361500 Bva08g01403 08 7360553 7361500 ECH