Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01402 ATGAAGAGAGGGAAGTTGGACCCGTTTGTGTTGCCGAGTAGGCTAAGACtgcttcaaattttgatgGGTGTAATGCTGCTATATATGCTGTTCATGAGCTTCGAAATTCCTCTTGCTTTCAGAACCGGGTTGGGTTCGGTTTCTTCTGACGGTGCTTTTGGGTTTCTGAGTGACGCATTGCCCAGACCTTTGCTGCTCGAAAGTGAAGAAGAACTCACAAGTTACAGCAAGGCTACAATTGGGCCTTCAGAGGAAGACTTTATGGTTTCTCAAGGATCAGTGTACCGGAAACCCGAGAGGCTCATGCGGGAGTTGAAGAAAGTTTCTGGCTTGGCCTTCAATGAGAGTTTATCTGACAGTAATGCTGCTAAAGATGAGTTTTCTGAACTTCACAAGGCAGCAAGGCATGCTTGGATACTGGGAAAGAAGCTCTGGGATGAAATAGAGAGTGGGAAAATTGACGCCAATGCAAAGTCCAAGGCCGAGAATCTCTCCGATTCGTGCCCACACTCGATTTCGCTTCCTGGGTTTGAATTTCGGGAGCGAAAAGGGGTCATGGTACTTCCGTGTGGGTTGACGCTGTGGTCTCACTTAACAGTGGTGGGGACACCGCGCTGGGCTCACGCAGAACATGATCCCAAAATAGCCATGTTGAAGGAAGGGGATGATTCGGTGATGGTGTCGCAGTTTATGATGGAATTACAGGGGTTGAAGACGGTGGACAAAGAGGAGCCCCCAAGGATACTACATTTCAATCCAAGGCTGAAAGGGGATTGGAGTGGGAAACCAGTAATTGAGCAGAACACTTGCTATAGAATGCAGTGGGGTTCTGCTCTAAGGTGTGAAGGGTGGAAATCATGGGCGGACGAAGAAACTGTTGATGGACAGGTGAAATGTGAGAAGTGGATTCGTGATGATGACAATCACTCAGAAGAGTCAAAAGCAATATGGTGGTTGAGCAGACTCATAGGCCGAACGAAGAAGGTGACTGTAGACTGGCCTTATCCTTTCGCAGAGAGGAAATTGTTTGTTCTTACCTTAAGTGCTGGCTTGGAAGGTTATCATGTTAGTGTGGATGGGAGGCATGTAACCTCTTTCCCCTATCGCACGgGATTTGCTCTTGAGGATGCTACTGGACTATCTATAATCGGGGATGTTGATGTGCACTCTGTATTTGCTGCTTCCTTACCTTCATCGCATCCAAGTTTTGCCCCACAGATGCATCTTGAATATCTTCCTCAATGGAAGGCTCCACCTATTCCCCATCTTAATGTGGAGCTTTTCATTGGCATTCTTTCTGCTGGCAACCATTTTGCTGAACGGATGGCTGTGAGGAAGTCCTGGATGCAACATAAGTTAATCAAATCATCACATGTTGTGGCTCGGTTCTTTGTAGCCTTGCATGGAAGGAAGGATATAAATGTCGACATAAAGAAAGAGGCAGAGTATTTTGGTGATATAATCACAGTCCCATATATGGACAATTATGACCTTGTTGTCTTGAAGACTATAGCTATCTGTGAATACGGGGTTCGTTCAGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTCCGAGTGGATTCTATCATGAGTGAAGCAAGAAAAGTTGGACGAGATAGGAGCCTCTACATTGGAAACATGAATTACCACCATAGGCCCCTTCGTCATGGAAAATGGGCAGTGACATATGAGGAATGGCTGGAGGAAGAGTATCCTACCTATGCTAATGGCCCGGGTTACATACTCTCATCTGACATTGCCCAGTTCATCGTTTCTGAGTTTGAGAAGAACAGATTAAAAATATTCAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCAATTCAACAGTTCAAGAACAGTAGAGTATGTGCACAGCTTGCAGTTCTGCCAATTTGGATGCATCGAGGATTACTACACTGCACATTACCAATCTCCACGGCAGATGACCTGTATGTGGGATAAATTACAACGTCAAGGAAAACCCCTGTGCTGCAACATGAGATG 2021 0.4547 MKRGKLDPFVLPSRLRLLQILMGVMLLYMLFMSFEIPLAFRTGLGSVSSDGAFGFLSDALPRPLLLESEEELTSYSKATIGPSEEDFMVSQGSVYRKPERLMRELKKVSGLAFNESLSDSNAAKDEFSELHKAARHAWILGKKLWDEIESGKIDANAKSKAENLSDSCPHSISLPGFEFRERKGVMVLPCGLTLWSHLTVVGTPRWAHAEHDPKIAMLKEGDDSVMVSQFMMELQGLKTVDKEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGSALRCEGWKSWADEETVDGQVKCEKWIRDDDNHSEESKAIWWLSRLIGRTKKVTVDWPYPFAERKLFVLTLSAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSIIGDVDVHSVFAASLPSSHPSFAPQMHLEYLPQWKAPPIPHLNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINVDIKKEAEYFGDIITVPYMDNYDLVVLKTIAICEYGVRSVAAKYIMKCDDDTFVRVDSIMSEARKVGRDRSLYIGNMNYHHRPLRHGKWAVTYEEWLEEEYPTYANGPGYILSSDIAQFIVSEFEKNRLKIFKMEDVSMGMWVEQFNSSRTVEYVHSLQFCQFGCIEDYYTAHYQSPRQMTCMWDKLQRQGKPLCCNMR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01402 673 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 184 394 IPR001079 GO:0030246
Bva08g01402 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 186 392 IPR013320 -
Bva08g01402 673 Gene3D - 421 664 - -
Bva08g01402 673 Pfam Galactosyltransferase 440 621 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva08g01402 673 Pfam Galactoside-binding lectin 185 392 IPR001079 GO:0030246
Bva08g01402 673 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 10 673 - -
Bva08g01402 673 Gene3D - 222 392 - -
Bva08g01402 673 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 10 673 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva08g01402 673 SMART Gal_bind_lectin_2 188 393 IPR001079 GO:0030246
Bva08g01402 673 CDD GLECT 188 392 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01402 Bva-Chr8 7355166 7359044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01402 2 673 Glycosyltransferase AT1G74800 61.640 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01402 K20843 - csv:101206587 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01402 08 7355166 7359044 Bva08g01402 08 7355166 7359044 ECH