Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01400 ATGGGTTCTCGGCTGCTGCAGATAGTTGCAGTACTATTTACAGTGACCTTATTTGGAGAAATCAGGACAAATGCCGCTGAGTGTAGTCCTGATGACTTGGAAGCATTAATCAGTTTCAAGAATGGGATTCAAAGGGATTCATCTGGCCGTCTCGCAAAATGGGTTGGCGAGAGCTGCTGTGACTGGGAAGGAGTTGTGTGTGATAATGCAAGTGGTAGGGTGACACAGATTCGTCTTCCTGGATTCATTTCCACAGATGAAGATCTCTATCAATCTGAGATGACGGGCATGCTTTCGCCTTCCATAACGCTCCTCTCCTCTCTTGATACCATTGATCTCGGTGGTTTAATCGGTCTCAGTGGAACAATTCCAGAAACCATTGGCGTTCGCCTGCCAAAGCTTAAAAAGCTCTTTCTCTATGGCAACAATCTAACTGGTCCAGTACCAGAAAGCATCTCTGAGCTGTCGAACCTCCAAGAACTGCATCTACATGAAAATAGACTATCTGGGTCGATCCCTTCAAGCCTCGGGAGCCTCAAAAATCTGCAAAGGTTGTTGCTTTATTCAAATCACTTCTCAGGTACCTTACCAGACTCATTTGGGAATCTGACAAATTTGGTAGAATTGGATATCCATGGCAACTCTCTAAGTGGTAATATACCAGATATATTTGGTGAAATGCAGGTTCTAGAAAAGCTTGATCTTTCAAGCAATCTGTTAAGCGGGAAAATCCCTTCTTcaataactaatttaactGCCATTTCAGTTCTGTACATGGACACCAATTATCTTGAAGGAACCATCCCATTTCCCTCAAGATCTGGTGAAATGCCTTCATTGGGATTCTTAAGGCTCAATGATAACCATTTAACTGGAAATTTACCTTCCAATTTGGGTTATTTGGTCTCTCTCCAACGGGTTTCATTATCAAACAACAAGCTTGAGGGAGCATTACCTTCAAGTTTGGGCAATCTACGCTCTTTGACAGAGCTTTATCTTAGTGGCAACTTGTTATCTGGCCAAATACCAAATTCAATAGGCCAAAACTCTCAGCTGTTGATGTTGAGTATCTCTTACAATATGCTTCAAGGGCCACTACCTGAAGAGATTTCTTCCCTAAAAAACCTTCAAACTCTTGATCTTTCTTTTAACTCTCTGAACCTCTCTGCTATCCCAAAATGGCTAACAGAATTGCCATCACTGTCAAAACTGCACCTTGCAGGGTGTGGAATTGAGGGCCAAATTCCAGAGTTGTCCCAAACATCTCTTAATTCAATACAGGAACTGGATTTATCAGTCAACAATCTCATTGGAAGCATCCCAGCATGGCTGGGAAGCCTCGACCAACTCTACTTGTTAAATCTCTCAAGGAATTCACTAGAGTCATTCATCCCAGATTCCATCATAAAATTGCGCGATTTGGGTGTTCTTGATCTTCACTCGAATAAGCTAACAGGCTCCATAACTCAAGCCATTTCTGGGGAATCACTAACTCATGTTGATCTTTCTGATAATAGCTTCTCAAATGGAGTTGAGGACATTGGTATAGGATCAAAAGACATTCAATATCTGAATTTGTCTCACAACTTTCTGAGAGGTGGATTGCCAAGTTCCATTGGGAGATTGAAACCATTGCATAGTTTGGATTTGAGCTTCAATGAATTAGCCTCCAACCTGCCAGAGACGTTGGCAAATTTAACCTCTTTAGAGACCCTCAAGCTGCAGAAGAATAACTTTACAGGTAACATACCAAAGGAGTTactcaagttgaccaagctaAGGGAATTGAATTTATCAGACAATTCTTTTGAAGGGGAAATTCCTGAGGGAAAACCACTGATAGATTTTCCTAGAAGCTGTTATGCTGGTAACATACGTTTATGTGGGAAGCCTCTCTCTCCCTGCAGACCTTG 1913 0.4124 MGSRLLQIVAVLFTVTLFGEIRTNAAECSPDDLEALISFKNGIQRDSSGRLAKWVGESCCDWEGVVCDNASGRVTQIRLPGFISTDEDLYQSEMTGMLSPSITLLSSLDTIDLGGLIGLSGTIPETIGVRLPKLKKLFLYGNNLTGPVPESISELSNLQELHLHENRLSGSIPSSLGSLKNLQRLLLYSNHFSGTLPDSFGNLTNLVELDIHGNSLSGNIPDIFGEMQVLEKLDLSSNLLSGKIPSSITNLTAISVLYMDTNYLEGTIPFPSRSGEMPSLGFLRLNDNHLTGNLPSNLGYLVSLQRVSLSNNKLEGALPSSLGNLRSLTELYLSGNLLSGQIPNSIGQNSQLLMLSISYNMLQGPLPEEISSLKNLQTLDLSFNSLNLSAIPKWLTELPSLSKLHLAGCGIEGQIPELSQTSLNSIQELDLSVNNLIGSIPAWLGSLDQLYLLNLSRNSLESFIPDSIIKLRDLGVLDLHSNKLTGSITQAISGESLTHVDLSDNSFSNGVEDIGIGSKDIQYLNLSHNFLRGGLPSSIGRLKPLHSLDLSFNELASNLPETLANLTSLETLKLQKNNFTGNIPKELLKLTKLRELNLSDNSFEGEIPEGKPLIDFPRSCYAGNIRLCGKPLSPCRP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01400 637 SMART LRR_typ_2 373 398 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 447 471 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 131 154 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 325 349 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 227 251 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 542 565 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 179 202 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 301 324 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 566 590 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 155 178 IPR003591 -
Bva08g01400 637 SMART LRR_typ_2 203 226 IPR003591 -
Bva08g01400 637 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 5 636 - -
Bva08g01400 637 SMART LRR_sd22_2 131 157 - -
Bva08g01400 637 SMART LRR_sd22_2 373 390 - -
Bva08g01400 637 SMART LRR_sd22_2 203 222 - -
Bva08g01400 637 SMART LRR_sd22_2 227 253 - -
Bva08g01400 637 SMART LRR_sd22_2 542 561 - -
Bva08g01400 637 SMART LRR_sd22_2 325 340 - -
Bva08g01400 637 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
Bva08g01400 637 Pfam Leucine rich repeat 426 484 IPR001611 GO:0005515
Bva08g01400 637 Pfam Leucine rich repeat 545 602 IPR001611 GO:0005515
Bva08g01400 637 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Bva08g01400 637 SUPERFAMILY L domain-like 303 614 - -
Bva08g01400 637 Pfam Leucine Rich Repeat 522 541 IPR001611 GO:0005515
Bva08g01400 637 Pfam Leucine Rich Repeat 327 347 IPR001611 GO:0005515
Bva08g01400 637 Gene3D Ribonuclease Inhibitor 24 86 IPR032675 -
Bva08g01400 637 Gene3D Ribonuclease Inhibitor 87 270 IPR032675 -
Bva08g01400 637 PRINTS Leucine-rich repeat signature 373 386 - -
Bva08g01400 637 PRINTS Leucine-rich repeat signature 230 243 - -
Bva08g01400 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 636 - -
Bva08g01400 637 SUPERFAMILY L domain-like 57 386 - -
Bva08g01400 637 Gene3D Ribonuclease Inhibitor 271 366 IPR032675 -
Bva08g01400 637 Gene3D Ribonuclease Inhibitor 367 637 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01400 119 635 Receptor kinase-like Gene Family AT5G46330 36.138 5.28e-75 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01400 - - gmx:102670178 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01400 08 7345722 7347873 Bva08g01400 08 7345722 7347873 ECH