Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01384 ATGCCTATTCCCTCCAAGCGCTACTCCCTGAGTCCACAGCAATCCGCTTCGACCGCCGGGTCGACTCACGATCTCAAGCAACGAGTCATCACTTGCCTCAACAAGCTCTCCGACCGCGACACCCTCGCCATCGCTGCCGGCGAGCTTGAGTCCATTGCTCGGAGCTTGAACCACGACTTGTTCTCGCCGTTTCTCAACTGCATTTACAACACTGACTCTTCTTCCAAATCGCCGGTTCGGAAGCAATGCGTTCACCTCTTGACGGTTCTTTCTCACTTCCACGGCGACGCTCTCTCTCCATTCGTTTCGAAGATGATCTCCACCGTCCTCCGCCGCCTCCGCGACCCTGACTCCGCTGTCAGATCGGCTTGCGTTGATGCCGTCACTGCAATGTCCTCGCGGATAACAAAACCGCCGTTCTCGGCAGCTTTCCTGAAGCCTTTGATGGAGACTCTGACACAGGAGCAGGATGTGAACTCGCAAATCGGTGCAGCGCTCTGTCTTGCTGCGGCAATTGAATCGGCGCCGGAGCCGGATGCGGAGTTGTTGCGGAAAGCTACTTTGCCGAGGTTGGGGAAGCTGGTGAAGAATGAGGTGTGCAAGGCGAAGGCTGCGCTGTTGGTGCTAATTGGGAGCATCATTGGTGTTAGCGGAGTGTCGAGTCGGGGAGTGTTGAATTGGTTAGTACCTTGCCTCGTTGAGTTTTTGAGCAATGAGGACTGGGCGGTGAGAAAGGCAGCGGCTGAGGCTCTGGGAAAGGTGGCTTTGGTGGAGAAAGATTTGGCTTCGCAGTATAAGGCGCAGTGCTTGGATTCCTTCCAAAATCGAAGATTCGACAAGGTCAAGGTAGTTCGAGAAACTATGACTCGTACCTTGGAGATTTGGAAGGAGGTAGCTGATTCATCTGAGGATGTTTTTTCTACAGCTAAATCCACATGTTCTTTATCTGATGATGGTAAAGATCAGTGTGTAACCAAAAGTGGAAATGGTGTTGGCGTTAAATCTTCTTTACCGAAGAAAACAGTTCCAATGAACATATCGCTGCCACCGACAGTTTCATGTTTAGCCACAGTCAAAAGAGAAAGCCCTCTAAAGAGTATTGGcaaaaattcaagcatagggATATCACGTGAGATGGACCACGAAAAACGCTCTGCTCAGAAACTTGAGACTACAGAATCACGAGAGCCCTCTTTGAACATGGCTAGTGAAGATGATATCAAAAGGTGTGATTTTGAAGCTTCTAAACCAATGCAGAATCCGAATTCTGGAAATTCAAGGGCAGATGTAAAGCGTGCCCTCTTCAGCAAGAGTTCTGATGAGAAAGTGCGGAAAGTTGGTAGTTTGAGATCTCGGTCTCGTGTGGTTCCATTTCATGATGATGACTATCCTGACTCAGATACTACATTTAATAATGTTAATGAAGTTTGTGAGAATCCCCAAGATGCTGAGGATTTATCTTTGATCCAGGAACAACTTATTCAAATTGAAAACCAGCAGTCCAGTCTCTTGGACCTCCTCCAGAGATTTATTGGAAACTCCCAAAGTGGGATGAATTCTCTGGAGACACGTGTAAATGGTCTAGAGAGGGCTCTGGATGAAATGTCATATGACTTGGCAGTATCAAGTGGCAGAATTCCCAATATGGACTCCACAGGAGATATGTGTTGCAAGCTACCTGGTACTGAATTTTTGAGTTCCAAATTCTGGAAGAGGACTGACCAGCGATATTCTACGTCAAGGCTCTCTTTTGGAAGCATGGCATCACCGAAAGCTGTGCATAATGAAACTGATAATGATCCTAGCTTGGAAATGTTCACTACAAACAGCAAAAGATTTCAACATCGCAGGGGTGAATTATTTCTGGACCCTCTGGCCGATGGTGGAAGTAACTTGAATGGACATTTAGggaaatattcatataaaacaCCGAAGAAAATGATCCAAGAGACTGATCGAACTGAAAGTAACAATGCCAGCCAGCTTGACGGTATTTTATCGGCTAATTCAGCAGCCACAAGGAACCAGCATCGCAGATCGTCCGTGTA 2048 0.4688 MPIPSKRYSLSPQQSASTAGSTHDLKQRVITCLNKLSDRDTLAIAAGELESIARSLNHDLFSPFLNCIYNTDSSSKSPVRKQCVHLLTVLSHFHGDALSPFVSKMISTVLRRLRDPDSAVRSACVDAVTAMSSRITKPPFSAAFLKPLMETLTQEQDVNSQIGAALCLAAAIESAPEPDAELLRKATLPRLGKLVKNEVCKAKAALLVLIGSIIGVSGVSSRGVLNWLVPCLVEFLSNEDWAVRKAAAEALGKVALVEKDLASQYKAQCLDSFQNRRFDKVKVVRETMTRTLEIWKEVADSSEDVFSTAKSTCSLSDDGKDQCVTKSGNGVGVKSSLPKKTVPMNISLPPTVSCLATVKRESPLKSIGKNSSIGISREMDHEKRSAQKLETTESREPSLNMASEDDIKRCDFEASKPMQNPNSGNSRADVKRALFSKSSDEKVRKVGSLRSRSRVVPFHDDDYPDSDTTFNNVNEVCENPQDAEDLSLIQEQLIQIENQQSSLLDLLQRFIGNSQSGMNSLETRVNGLERALDEMSYDLAVSSGRIPNMDSTGDMCCKLPGTEFLSSKFWKRTDQRYSTSRLSFGSMASPKAVHNETDNDPSLEMFTTNSKRFQHRRGELFLDPLADGGSNLNGHLGKYSYKTPKKMIQETDRTESNNASQLDGILSANSAATRNQHRRSSV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01384 682 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 5 666 - -
Bva08g01384 682 SUPERFAMILY ARM repeat 29 292 IPR016024 -
Bva08g01384 682 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 666 IPR033337 GO:0005874|GO:0008017
Bva08g01384 682 MobiDBLite consensus disorder prediction 653 682 - -
Bva08g01384 682 MobiDBLite consensus disorder prediction 649 682 - -
Bva08g01384 682 Coils Coil 518 538 - -
Bva08g01384 682 Pfam HEAT repeats 224 258 - -
Bva08g01384 682 Gene3D - 17 366 IPR011989 -
Bva08g01384 682 MobiDBLite consensus disorder prediction 7 22 - -
Bva08g01384 682 MobiDBLite consensus disorder prediction 1 22 - -
Bva08g01384 682 MobiDBLite consensus disorder prediction 366 406 - -
Bva08g01384 682 MobiDBLite consensus disorder prediction 375 391 - -
Bva08g01384 682 ProSiteProfiles HEAT repeat profile. 228 266 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01384 Bva-Chr8 7253581 7257653 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01384 - - mtr:MTR_5g036950 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01384 08 7253581 7257653 Bva08g01384 08 7253581 7257653 ECH