Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01380 ATGGCTTTATCGCACATAGCTTCGAGATCCAATCTGCTCAAGCCCATTTCCGCTGCTTTATCCTGCACCCCTTCTCTCCGCCGTTCCATTGCATCTGCCGCCGATGACTCCACCACTCTCACCATTGAGACCGCCCTTCCCTTCACCTTCCACCAGTGCGATCCACCCTCACGCGCCGTTGACACCAACCCGAAGGAGCTAATGACGTTCTTCCGCGACATGGCATTGATGCGGCGAATGGAGATTGCTGCCGATTCACTCTACAAGGCCAAGTTGATCCGAGGGTTCTGTCACTTGTATGATGGACAGGAAGCTGTGGGTGTGGGCATGGAAGCAGCGATTACAAAGAAGGATTGTATTATCACAGCTTACCGTGATCACTGCATATTCCTTGGTCGCGGTGGAAACCTTCTCGAGATTTTCTCTGAGCTCATGGGTCGCCAAGCTGGGTGCTCAAATGGAAAGGGTGGGTCTATGCATTTCTATAGGAAGGAAGCTGGTTTCTATGGTGGGCATGGGATTGTTGGGGCTCAGGTACCACTGGGGTGTGGATTGGCTTTTGCCCAGAAGTACTGTAAGGATGAGAATGTGACTTTTGCTTTGTACGGTGATGGTGCGGCAAATCAGGGGCAGTTGTTCGAGGCCCTCAACATTTCTGCTCTTTGGGATCTTCCAGCAATTTTGGTCTGCGAGAATAATCACTATGGAATGGGAACGGCAGAGTGGAGGGCGGCAAAGAGTCCTGCTTATTACAAGCGCGGGGATTATGTTCCTGGATTAAAGGTAGATGGTATGGATGTCCTCGCTGTGAAACAGGCGTGCAGATTTGCAAAGGAGCATGCTTTGAAGAATGGGCCCATTGTTCTTGAAATGGACACCTATAGGTACCATGGTCATTCCATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAAATTTCTGGCGTTAGACAGGAGCGTGATCCAATAGAGAGAGTAAGAAGGCTGTTGGTGTCTCATGACATTGCTACTGAAAAGGAGCTAAAGGACATTGAGAAGGATATCAGAAAAGAAGTTGACGATGCTATTGCTAAAGCGAAGGAGAGTCCGATGCCCGAGCCCTCTGAGCTTTTTACCAATGTATATGTCAAAGGTCTCGGGGTTGagTCATTTGGGGCTGATAGGAAAGAAGTGAGAGCAACTTTGCcgtg 1193 0.4946 MALSHIASRSNLLKPISAALSCTPSLRRSIASAADDSTTLTIETALPFTFHQCDPPSRAVDTNPKELMTFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVGVGMEAAITKKDCIITAYRDHCIFLGRGGNLLEIFSELMGRQAGCSNGKGGSMHFYRKEAGFYGGHGIVGAQVPLGCGLAFAQKYCKDENVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACRFAKEHALKNGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRRLLVSHDIATEKELKDIEKDIRKEVDDAIAKAKESPMPEPSELFTNVYVKGLGVESFGADRKEVRATLP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01380 397 CDD TPP_E1_PDC_ADC_BCADC 70 360 - -
Bva08g01380 397 MobiDBLite consensus disorder prediction 300 319 - -
Bva08g01380 397 Pfam Dehydrogenase E1 component 73 368 IPR001017 GO:0016624
Bva08g01380 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 1 397 - -
Bva08g01380 397 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 1 397 - -
Bva08g01380 397 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 58 378 IPR029061 -
Bva08g01380 397 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 65 377 IPR017597 GO:0004739|GO:0006086|GO:0043231
Bva08g01380 397 Gene3D - 27 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01380 Bva-Chr8 7222331 7227381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01380 1 397 Acyl Lipid Metabolism Gene Families AT1G24180 80.151 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01380 K00161 - jre:108989818 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01380 08 7222331 7227381 Bva08g01380 08 7222331 7227381 ECH