Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01379 ATGCTTCCCTTCCGATTATGCGCTGTCGTTTTGTTGGGCCTGGTCTATCTGCTATTCCCGCCGTTCTGCCTCGGGATTCGGTCGTTTCCGATCCGGGTTATCGACGGGGGCAATGGGCTAGAAATGGGATACGACGGTTCGTTCCAATTCGCTGAAGCGCCGAGCTACCGTAATGGGGCGGGGTGCCTTTTCTCCGGCCATAGGCAATTGCTTTTGTCTTGCGACCCTTCTCTGATTCACATAGCCATGACCTTGGATTCTGAGTACTTCAGGGGCTCCATTGCCGCCGTTCAGTCCGTTCTCACACACGCTTCCTGCCCAGAAAACGTCTTCTTTCACTTCATTGCAGCAGAGTTCGACCCTGCGAGTCCTCGGGTCTTGATCCAACTCGTCCGGTCCATCTTCCCTTCTCTCAATTTCAAAGTTTACATCTTCAGAGAAGACAGAGTTATCAACCTGATCTCTTCGTCCATTCGTGAAGCCCTGGAGAACCCACTGAACTACGCGAGGAACTATCTGGGTGATATCTTAGATGCTTGTATTGACCGAGTTATCTACCTTGACTCGGACTTGGTCGTGGTTGACGACATTGACGAGCTCTGGAAAGTGAAGCTCACTGGTTCACGAGTCATTGGGGCACCCGAGTACTGCCATGCCAACTTTACCAATTACTTCACCGAGACTTTCTGGTCCGACCCGGTTCTTTCTCGAGTCTTCTCTTCGAGGAAACCCTGTTATTTCAACACTGGGGTGATGGTGATGGATTTGGCAAGGTGGAGGCAAGGGAATTACAGGAAGAGGATAGAGAATTGGATGGAATTGCAGAGGAAAAAGAGGATTTACGAGTTGGGTTCTCTCCCACCTTTCTTACTTGTCTTTGCCGGGAACGTGGAAGCCATTGATCACAGGTGGAACCAGCATGGGTTGGGTGGTGATAACGTTCATGGCAGCTGCAGGTCTCTGCACCCTGGTCGCGTGAGTCTCATGCATTGGAGTGGTAAAGGGAAGCCATGGGTGAGGCTTGATGCCAAGAATCCTTGCCCAGTGGATCGTCTTTGGGAGCCATATGATCTCTTCAAGCCAGGGCATCATCGGAATAGAGCAAGAGATCAACCGTGgagcttttcttcttctatcttGGGGGGATATTCCCAGGATTTATTATG 1166 0.5017 MLPFRLCAVVLLGLVYLLFPPFCLGIRSFPIRVIDGGNGLEMGYDGSFQFAEAPSYRNGAGCLFSGHRQLLLSCDPSLIHIAMTLDSEYFRGSIAAVQSVLTHASCPENVFFHFIAAEFDPASPRVLIQLVRSIFPSLNFKVYIFREDRVINLISSSIREALENPLNYARNYLGDILDACIDRVIYLDSDLVVVDDIDELWKVKLTGSRVIGAPEYCHANFTNYFTETFWSDPVLSRVFSSRKPCYFNTGVMVMDLARWRQGNYRKRIENWMELQRKKRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVHGSCRSLHPGRVSLMHWSGKGKPWVRLDAKNPCPVDRLWEPYDLFKPGHHRNRARDQPWSFSSSILGGYSQDLL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01379 388 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 361 IPR029044 -
Bva08g01379 388 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 378 - -
Bva08g01379 388 Pfam Glycosyl transferase family 8 80 340 IPR002495 GO:0016757
Bva08g01379 388 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 9 378 - -
Bva08g01379 388 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 349 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01379 Bva-Chr8 7217846 7219724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01379 2 377 Glycosyltransferase AT1G70090 70.833 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01379 - - vra:106762685 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01379 08 7217846 7219724 Bva08g01379 08 7217846 7219724 ECH