Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01373 ATGTCGATCTTTTCTCGAGCTCTGTgctttattttgttatgtatTTTAGGATTGGATTCTGGTTACATCTTCGGGCATGCTTTGAAGCTTCCCCTCCGACCCAAGGACCTGCTTCCTGTTTTGCCTAAAGAAATTTCATGGCCGGTCCTGAACACTTTCCACAGTGCTGTGGATTTGTTGCCTAATTTTGTTGGCTCCGTGAAACCCAATAATAGCTCTATTGAGTGGAAAGGTGCCTGCTTTTATGATAACAAAGCTAAGCTAGAACTCACAGCTAGTGATCGCGAGGAACCTGGGTTGGGAGGTGGCGTTCTCTATCTGGAGACATCATCCGCACACAGCTGGACATGTATGGATCTTTATGTTTTTGCAACACCGTATAGGATTACATGGGACTACTACTTCGCCGCCCGAGATCATACCTTTAAATTTGACTCATGGGAAGAGCCTGCAGAGATGGAATATGTAAAGCAGCATGGGGTTTCTGTGTTCCTCATGCCATCAGGGATGCTGGGAACCCTGCTTTCTTTAATTGATGTCTTGCCCCTGTTCTCTAACACTGCATGGGGTCAGAAAGCTAACTTAGACTTTCTCAAAAAGCACATGGGGGCTACCTTTGAGAAACGCAGTAAGCCTTGGTGTGCAACTATAAATCCTGCAGATGTTCATTCAGGAGATTTCTTAGCTGTGTCAAAGATCCGTGGTAGGTGGGGTGGATTTGAGACACTAGAAAAGTGGGTAACCGGTGCATTTGCTGGTCATACAGCAGTTTGCTTGAAAGATGAGAAGGGCAATTTATGGGTGGGTGAATCAGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCGTGGGATGAATGGTGGGAATTGGCCCTTAAAGATAGTTCCAATCCACAGATAGCCTTGCTTCCCTTGCATCCAGAGTTGCGTGCAAGATTCAACACTACTGCAGCATGGGAGTATGCTCGGAGCATGTCTGGCAAGCCATATGGTTATCACAATATGATATTTAGTTGGATTGACACAGTAACAGACAACTATCCTCCACCTCTTGATGCTCACTTGGTCATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGACTATGCTGCTAATATGTGGAACGAAGCTTTGAATAAGCGGTTAGGGACTGAGGGTTTGGATTTACATGACATTCTCTTGGAGACAGAGAAGCGGGGGATAGCATTTGACGAGTTATTGACAATACCCGAGCAAGACGAATGGGTTTACAGTGACGGGAAATCCACAACTTGTGTTGCATTCATACTATCCATGTACAAAGCAGCCGGAATCTTGGGGCCTGTTTCCAGCTCGATCCAAGTCACTGAATTCACCATTCGTGATGCTTACATGCTGAAGATTTTTGAAGACAATCAAACACGCCTACCAAGTTGGTGCAACAATGAGAGTGATCAACTTCCATTCTGCCAGATTCTTGGTGAGTATAGGATGGAACTGCCTGGCTACAACGCCTTAGAGCCTTACGCCAACATGAATGAGAACTGTCCATCCCTGCCCCCTATTTATGACAGGCCGCGGCGCTGCTA 1580 0.4532 MSIFSRALCFILLCILGLDSGYIFGHALKLPLRPKDLLPVLPKEISWPVLNTFHSAVDLLPNFVGSVKPNNSSIEWKGACFYDNKAKLELTASDREEPGLGGGVLYLETSSAHSWTCMDLYVFATPYRITWDYYFAARDHTFKFDSWEEPAEMEYVKQHGVSVFLMPSGMLGTLLSLIDVLPLFSNTAWGQKANLDFLKKHMGATFEKRSKPWCATINPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEKGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDSSNPQIALLPLHPELRARFNTTAAWEYARSMSGKPYGYHNMIFSWIDTVTDNYPPPLDAHLVISVMSMWTRLQPDYAANMWNEALNKRLGTEGLDLHDILLETEKRGIAFDELLTIPEQDEWVYSDGKSTTCVAFILSMYKAAGILGPVSSSIQVTEFTIRDAYMLKIFEDNQTRLPSWCNNESDQLPFCQILGEYRMELPGYNALEPYANMNENCPSLPPIYDRPRRC 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01373 526 Gene3D endopeptidase domain like (from Nostoc punctiforme) 221 350 - -
Bva08g01373 526 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 8 526 - -
Bva08g01373 526 PANTHER OS01G0793500 PROTEIN 8 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01373 Bva-Chr8 7191785 7195871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01373 - - qsu:112008579 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01373 08 7191785 7195871 Bva08g01373 08 7191785 7195871 ECH