Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01365 ATGAAAATGGGTTCAATAAACTCATTCAAAGACCAGTTACTCTCCTTGGCCAAGAAGCTCCTTCCCTATGTTATCTATTCTCTGCTTCCCATAGCTCTTCTTCGCCTATACTTTAACCCTTTGGCTTTTCTTCCATCTGCAGAAACAGAACTTCCCCATTCCAGCCTCATTACAGTCGCCTCCTActcttcttattcttctcctcctccttctGCGGaaaaggaaagaacttTTGAGACCCCATGTGACTATTTCAGTGGAAAATGGATCCCTGACAAGATAGGCCCTCTATATAATGGTACAACCTGTGGCACCATCAAAGAAGGCCAGAACTGCATCTCTCATGGAAGACTTGATATGGGTTATCTTTATTGGAGGTGGAAACCCAGTGAATGCAATCTCCCAAGGTTTGAACCTGAAACTTTTATCCAACTCCTTCAAAACAAACACTTAGCTTTTGTGGGGGACTCTATGGCTAGGAACCAATTAGAGTCCCTTCTTTGCATGCTAGCCACTGCTTCGACCCCTAACCTTATCTACAGAAATGGTGAAGACAACAAATTTCGCAGATGGCACTTTCCTTCTCATAATATAAGTGTCTCAGTATATTGGTCCCCCTTTCTTGTGGAAGGcattgaaaaatcaaacacaGGACCAAATCATAATGAATTGTACTTGGATCAAATTGATGAGAAATGGGCAAAAGATTTGGATAGAATGGACTTGATTGTGCTATCAACTGGGCATTGGTTTTTGCATCCTGCAGTTTATTTTGAAGGTGGTTCAGTTTTTGGGTGCCATTATTGTCCTGGTCTTAATCACACTGAAATTGGGTTTTATGATGTGTTGAGGAAGGCTTTGAGAACCACACTTAATAGCATAATTGAAAGAAGAGGAGGCAAGGGGAGTGGACTTGATGTAATTGTGACAACATTTTCACCTGCACATTTTGAAGGTGAGTGGGATAAGGCTGGTGCTTGTCCTAAGACTAAGCCTTATAGAAATGGAGAGAAGGAGCTTGAAGGAATGGATGCTGAGATGAGAGAGATTGAGATAGAACAAGTGGAAGCTGCAAAGAAAAATGCCATTGCCAAGAGATTTGGAGGTTTAAGGTTGGAGGCATTGGATGTAACCAAATTGGCACTGTTGAGGCCAGATGGGCACCCAGGTCCTTATATGCATCCATTTCCATTTGCTAATGGGGTTCAAGAGCGTGTGCAGAATGATTGTGTTCATTGGTGTTTGCCAGGGCCTATAGACACCTGGAATGAGATTTTCCTGGAGAAGATCAAGAAATGGAAAGGTCAACTCATGAGTGAAGAATG 1325 0.4068 MKMGSINSFKDQLLSLAKKLLPYVIYSLLPIALLRLYFNPLAFLPSAETELPHSSLITVASYSSYSSPPPSAEKERTFETPCDYFSGKWIPDKIGPLYNGTTCGTIKEGQNCISHGRLDMGYLYWRWKPSECNLPRFEPETFIQLLQNKHLAFVGDSMARNQLESLLCMLATASTPNLIYRNGEDNKFRRWHFPSHNISVSVYWSPFLVEGIEKSNTGPNHNELYLDQIDEKWAKDLDRMDLIVLSTGHWFLHPAVYFEGGSVFGCHYCPGLNHTEIGFYDVLRKALRTTLNSIIERRGGKGSGLDVIVTTFSPAHFEGEWDKAGACPKTKPYRNGEKELEGMDAEMREIEIEQVEAAKKNAIAKRFGGLRLEALDVTKLALLRPDGHPGPYMHPFPFANGVQERVQNDCVHWCLPGPIDTWNEIFLEKIKKWKGQLMSEE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01365 441 Pfam PMR5 N terminal Domain 81 133 IPR025846 -
Bva08g01365 441 Coils Coil 333 353 - -
Bva08g01365 441 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 134 428 IPR026057 GO:0016740
Bva08g01365 441 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 434 IPR029962 GO:0016413
Bva08g01365 441 PANTHER PROTEIN ALTERED XYLOGLUCAN 4 14 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01365 Bva-Chr8 7168992 7171068 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01365 K23877 - gmx:100776316 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01365 08 7168992 7171068 Bva08g01365 08 7168992 7171068 ECH