Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01351 ATGGGTTTTACTTTCACTGTCTCACTTTACTCTCGGCCACAAGCACACTTGCAGAGGCAGAGAATGCATTCGCTAGCGCTAACCAGTGGTGGCTTGGGCAATTGTGCACAGTTTTTGCGGCTTCCAACTATTTATTCGGCTAGAAAATGTAGGAGAAGTTGTACGAGATTCAGAAGCTTGACTGTAAGGGCTGCTTCGAGTCGGACGAGAAGAGTTTATCGCCAGTCTCAGGCTGAAAGACCTTTGTCAAATGCCCCCATGCAGCAGATTGCATCTTTTGTTGTGCCTGCTGGCGTATTCGTTGCTGTTTCTTTTGTTTTGTGGAAATTTGTGGAGAAGCTTCTTACTCCGAAGCAATCAACACCTTCATCTGTAGAAAAACAATCTGCTTCACAAGGAATGAAGTGGTCTATTGCCGCCGGTACAAATTTGTTATCGAAACTTGGGGcaaagatagagaaagaatCAAAGCAGAAGCTCAATGAGTTTGCCCGAGAGCTGAGGGCATTTCCAAGCGTGGATATGTCAGGACGCAATTTTGGAGATGAAGGATTATTTTTCCTAGCTGAGAGTTTGGCATACAATCAGACTGCGGAGGAAGTAAGTTTTGCTGCGAATGGAATAACTGCAGCTGGATTGAAAGCCTTTGATGGTGTTCTTCAATCGAACATCACATTGAAGACTCTTGATCTTTCAGGAAACCCTATTGGAGATGAAGGAGTGAAGTGCCTATGTGACGTATTGGTGGACAACTCCAGTGTTGAGAAGCTGCAGTTGAATAGTACTGACTTGGGTGACGAGGGGGCAAGAGCTATCGCAGAAATGTTGAAGAAAAACACAAGTCTGCAGATTCTTGAACTTAATAACAATATGATTGAATATTCTGGGTTTACAAGTCTGGCTGGTGCACTTCTTGAGAATAAAAGCATGAGAAATATACATCTCAATGGCAATTATGGTGGTGCTTTGGGCGCTAATGCATTTGCTAAAGCCTTTGAGAGCAACAAGTCTTTAAGGGAACTTCATTTGCATGGAAATTCTATTGGGGATGAGGGAGTCCGGGCCTTGATGTCAGGATTACCTTCACATAAAGGGAAAATCACACTTCTTGACATTGGCAACAACTCTTTTAGTGCTAAAGGTGCATTTCATGTTGCTGAATATATTCGGAAGAGCAAGAGCCTGTTATGGTTGAACCTTTACATGAATGACATTGGTGATGAGGGAGCTGAAAAAATTGCAGATGCTTTGAAGGAAAACCGGTCCATAACAACATTAGATCTGGGTGGAAATAACATTCGTGCTGCGGGAGTTAGTGCCATTGCTCGAGTTTTGAAAGATAATTCAGTCATTACTACTCTAGAACTTAGTTATAATCCAATTGGACCCGATGGAGCCGAGGCCTTAGCTGAAGTTATCAAGTTTCATGGAAACGTGAAAATCCTTAAGCTTGGTTGGTGCCAGatAGGAGCAAAAGGGGCAGATTTCATTGCCGATGCtttgaaatataatactaCTATATCAGTTTTGGATTTGCGGGCAAATGGATTAAGAGATGAAGGTGCAGCTTGCTTAGCTCGCAGCTTGAAAGTGGTTAATGAGGCTTTAACTTCTATAGACTTGGGATTCAATGAAATAAGGGATGATGGGGCTTTCGCGATTGCCCAAGCACTAAAGGCTAATGATGATATAGCTGTCACATCCCTAAACATTTCCAGTAACTTCCTAACGAAATTTGGGCAGAGTGCTCTATCCGATGCAAAAGACCATGTCTATGAGATGACGGAAAAGGAAATCAACATTTTTCTATA 1811 0.4202 MGFTFTVSLYSRPQAHLQRQRMHSLALTSGGLGNCAQFLRLPTIYSARKCRRSCTRFRSLTVRAASSRTRRVYRQSQAERPLSNAPMQQIASFVVPAGVFVAVSFVLWKFVEKLLTPKQSTPSSVEKQSASQGMKWSIAAGTNLLSKLGAKIEKESKQKLNEFARELRAFPSVDMSGRNFGDEGLFFLAESLAYNQTAEEVSFAANGITAAGLKAFDGVLQSNITLKTLDLSGNPIGDEGVKCLCDVLVDNSSVEKLQLNSTDLGDEGARAIAEMLKKNTSLQILELNNNMIEYSGFTSLAGALLENKSMRNIHLNGNYGGALGANAFAKAFESNKSLRELHLHGNSIGDEGVRALMSGLPSHKGKITLLDIGNNSFSAKGAFHVAEYIRKSKSLLWLNLYMNDIGDEGAEKIADALKENRSITTLDLGGNNIRAAGVSAIARVLKDNSVITTLELSYNPIGPDGAEALAEVIKFHGNVKILKLGWCQIGAKGADFIADALKYNTTISVLDLRANGLRDEGAACLARSLKVVNEALTSIDLGFNEIRDDGAFAIAQALKANDDIAVTSLNISSNFLTKFGQSALSDAKDHVYEMTEKEINIFL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01351 603 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 66 397 - -
Bva08g01351 603 Gene3D Ribonuclease Inhibitor 147 250 IPR032675 -
Bva08g01351 603 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 517 601 - -
Bva08g01351 603 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 450 574 - -
Bva08g01351 603 Gene3D Ribonuclease Inhibitor 251 358 IPR032675 -
Bva08g01351 603 SUPERFAMILY RNI-like 315 590 - -
Bva08g01351 603 Gene3D Ribonuclease Inhibitor 453 600 IPR032675 -
Bva08g01351 603 SUPERFAMILY RNI-like 167 363 - -
Bva08g01351 603 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 66 397 - -
Bva08g01351 603 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 398 525 - -
Bva08g01351 603 Pfam Leucine Rich repeat 395 414 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 420 442 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 503 526 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 222 245 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 448 470 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 251 273 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 536 555 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 334 357 IPR001611 GO:0005515
Bva08g01351 603 Pfam Leucine Rich repeat 478 498 IPR001611 GO:0005515
Bva08g01351 603 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 450 574 - -
Bva08g01351 603 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 398 525 - -
Bva08g01351 603 SMART LRR_RI_2 504 531 - -
Bva08g01351 603 SMART LRR_RI_2 364 391 - -
Bva08g01351 603 SMART LRR_RI_2 223 250 - -
Bva08g01351 603 SMART LRR_RI_2 335 362 - -
Bva08g01351 603 SMART LRR_RI_2 392 419 - -
Bva08g01351 603 SMART LRR_RI_2 307 334 - -
Bva08g01351 603 SMART LRR_RI_2 476 503 - -
Bva08g01351 603 SMART LRR_RI_2 279 306 - -
Bva08g01351 603 SMART LRR_RI_2 251 278 - -
Bva08g01351 603 SMART LRR_RI_2 448 475 - -
Bva08g01351 603 SMART LRR_RI_2 420 447 - -
Bva08g01351 603 SMART LRR_RI_2 533 560 - -
Bva08g01351 603 PANTHER NACHT, LRR AND CARD DOMAINS-CONTAINING 517 601 - -
Bva08g01351 603 Gene3D Ribonuclease Inhibitor 359 452 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01351 Bva-Chr8 7080239 7085595 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01351 K22614 - gmx:100784693 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01351 08 7080239 7085595 Bva08g01351 08 7080239 7085595 ECH