Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01345 ATGTCCGATACTTCGAGGGGTCGAGTTACTATTACACTTGGGCGTAGTGGTCAGGTTGTGAAGAGGGATCTATCTACAGCGGAGGATTCTTTCCCTTCATCTCTTTCCACAGCTGGGACTAAGCGGTCTGTAAGGGATAGAATTGGAAATAATGCAGAGAGTTCCTTACGGAATGGGAACCAACTCAGTGGCAATAAAAGACAGCGAGGAGACATAAGCATGGAAAATGGGCTGGCTGGTAATGTGGCAATTGGAAAAGATGATCTCAGATTAAAGCTAATGAGAAAAAGTGCATCTAGACGATCTGAAAGCAACAGTGATAGGAAGCACATGGACCTCCGTGAAAAACTGTCAAAGGCAGCTCAACCCCCAATGGCCCGTATTAATTCAAAGCGCCCCATCCAGGAACGAAGGGAAACAAGTATGTTGAGGCGAATCCCTTCAGCTAGAAGTTCTGATGATTTACCTCGTATGGAATCAGTGAGAAGCTCATACTCTCCTTGGACATTGGATCACATAAGACGAAGATCACCAGAAGGGTTTCCAAGTACTTCCAGGGGCATTTCTCCCCATAGAAATGTGGAAGACCTGCAGAGGAGGCCGTTAAACAGGATGTATGATGGTGTCAGGTCAGTTCCATATGTAACTAGGGATGTTCTTGAGCCTTCAAGGCCTCTAACAACTGCACCTGCATCTTTCATGGCACACCCCACAGGATCCACATTGCCTCCAGTAACTGCTAAGCCTGTAGCACCACATATTGGCCAACTGCCTCCACCAAGCAGTGCTACACAGAGGACTCCATTCATGGGTGATGAACCACATGCACACCAAACTGTTGATGGCCTGTTGAATGCATTGGGATTGGGAAAATATGCGCTTATCTTCAAGGCTGAGGAAGTGGATATGACTGCATTAAAGCAGATGGGCGAAAATGACCTAAAGGAGCTTGGAATTCCAATGGgtccaaggaaaaaaattcttcttgcTCTCACACCTCGTGCCAAACGTCATTCATG 1019 0.4563 MSDTSRGRVTITLGRSGQVVKRDLSTAEDSFPSSLSTAGTKRSVRDRIGNNAESSLRNGNQLSGNKRQRGDISMENGLAGNVAIGKDDLRLKLMRKSASRRSESNSDRKHMDLREKLSKAAQPPMARINSKRPIQERRETSMLRRIPSARSSDDLPRMESVRSSYSPWTLDHIRRRSPEGFPSTSRGISPHRNVEDLQRRPLNRMYDGVRSVPYVTRDVLEPSRPLTTAPASFMAHPTGSTLPPVTAKPVAPHIGQLPPPSSATQRTPFMGDEPHAHQTVDGLLNALGLGKYALIFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALTPRAKRHS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01345 339 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 337 - -
Bva08g01345 339 PANTHER OSJNBA0060P14.15 PROTEIN 1 337 - -
Bva08g01345 339 SUPERFAMILY SAM/Pointed domain 275 331 IPR013761 -
Bva08g01345 339 MobiDBLite consensus disorder prediction 132 160 - -
Bva08g01345 339 MobiDBLite consensus disorder prediction 174 196 - -
Bva08g01345 339 MobiDBLite consensus disorder prediction 233 276 - -
Bva08g01345 339 MobiDBLite consensus disorder prediction 27 70 - -
Bva08g01345 339 Pfam SAM domain (Sterile alpha motif) 278 331 IPR001660 GO:0005515
Bva08g01345 339 SMART SAM_4 271 337 IPR001660 GO:0005515
Bva08g01345 339 Gene3D - 277 339 IPR013761 -
Bva08g01345 339 MobiDBLite consensus disorder prediction 24 74 - -
Bva08g01345 339 ProSiteProfiles SAM domain profile. 275 338 IPR001660 GO:0005515
Bva08g01345 339 MobiDBLite consensus disorder prediction 132 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01345 Bva-Chr8 7050339 7055979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01345 275 331 Glycosyltransferase AT3G07170 59.649 9.57e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01345 - - lang:109333210 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01345 08 7050339 7055979 Bva08g01345 08 7050339 7055979 ECH