Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01341 ATGGCGGAGAAGGACCTTGAAACCATGAGGAGGAGGGTGGCCTCTGTTGCCAACCACTTCATTCTCTCCCATTCCGCGCGTAATGGTGAATTGGGGTTGTGTAATACTTCGATGAATGATAACTACCACCGGGTTCATGGAGAAGTTCCCTCTCACGACGTCGTTTGGAGGATTGTCCATGATGACTCTGGCAAGGAATTCATCGACATTGAATACGAGAAGGCTGTAGATGAAGGCATCGCTAAGATAACCATTAACAGGCCAGAGAGAAGGAATGCGTTCCGGCCACAGACGATTAAGGAGCTTATTCGTGCTTTCAATGATGCCAGGGATGATAGCTCTATAGGAGTCATCATTCTAACTGGGAAGGGAACCAAGGCATTTTGTAGCGGTGGTGATCAGGCTTTAAGAACCGAAGATGGTTATGCTGATTTGGAAAATATTGGCCGCCTTAATGTATTAGACTTGCAGGTGCAGATCCGTCGTCTTCCAAAACCTGTAATTGCAGTGGTAGCAGGTTATGCTGTTGGAGGAGGACACATACTACATATGGTCTGTGATCTAACCATTGCAGCAGATAATGCTATCTTCGGCCAAACTGGTCCTAAGGTAGGAAGTTTTGATGCTGGTTATGGAAGTTCCATTATGTCCCGTTTGGTAGGACCCAAGAAAGCACGTGAAATGTGGTTTCTAACAAGATTCTATAATGCTGTTGAAGCAGAGAAAATGGGACTTGTCAACACTGTTGTACCtCTCGAGAATTTggagaaagaaacaataaaatggTGTCGAGAGATCCTGAGGAACAGTCCAACCGCAATTCGCGTTTTAAAGTCGGCTCTTAATGCAGTGGATGATGGCCATGCTGGGCTGCAGGAACTTGGGGGAAATGCAACACTTGTATTTTATGGTACTGAGGAAGCTAAGGAGGGGAGGACAGCATACATGCAACGTAGACGCCCAGATTTTTCTAAGTTTCCTCGGAGACCTTA 992 0.4516 MAEKDLETMRRRVASVANHFILSHSARNGELGLCNTSMNDNYHRVHGEVPSHDVVWRIVHDDSGKEFIDIEYEKAVDEGIAKITINRPERRNAFRPQTIKELIRAFNDARDDSSIGVIILTGKGTKAFCSGGDQALRTEDGYADLENIGRLNVLDLQVQIRRLPKPVIAVVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYNAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHAGLQELGGNATLVFYGTEEAKEGRTAYMQRRRPDFSKFPRRP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01341 330 CDD crotonase-like 70 266 - -
Bva08g01341 330 TIGRFAM menB: naphthoate synthase 67 326 IPR010198 GO:0008935|GO:0009234
Bva08g01341 330 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 56 329 IPR010198 GO:0008935|GO:0009234
Bva08g01341 330 Gene3D - 270 318 IPR014748 -
Bva08g01341 330 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 168 188 IPR018376 GO:0003824
Bva08g01341 330 Gene3D - 52 269 - -
Bva08g01341 330 SUPERFAMILY ClpP/crotonase 71 326 IPR029045 -
Bva08g01341 330 Pfam Enoyl-CoA hydratase/isomerase 77 324 IPR001753 GO:0003824
Bva08g01341 330 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 7 330 IPR010198 GO:0008935|GO:0009234
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01341 5 330 Acyl Lipid Metabolism Gene Families AT1G60550 79.819 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01341 K01661 - pvy:116118368 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01341 08 7011095 7013691 Bva08g01341 08 7011095 7013691 ECH