Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01333 ATGGCCGGTTCTGAAGGTGTGGTTCAGCACGATGTTCagtctctcttctcttcttcggAAAGGGACTATCTGATTAGGAACAACGGTGATCAGGTTAAAACTGAAAGCTTGAAGGGGAAGAAACTTGGCTTGTATTTCTCGGCATCCTGGTGTGGTCCATGTCAACGTTTCACCCCAAATTTGGTGGAGGTGTACAAAGAAGCGTCTCCAAACGGTGATTTTGAGGTCATCTTTCTCTCGGCTGACGAAGATGATGAAGCGTTTAATAGGTACTTTGCCAAGATGCCGTGGCTTGCTATCCCTTTTTCTGATTCAGACACACGCAATCGCCTTGATGAATTGTTTGAGGTGAGGGGCATTCCCAACCTTGTAATTCTGGATGAAAATGGGAAAGTTGTCACTGAAGATGGAGTGGAGGTCATTCGTGAGTATGGAATTGAAGGATACCCCTTTAGTTCAGAAAGGATCAATGAGTTGAAAGAACAGGAAGAGGAAGCTAGGAAGAATCAATCCTTGAAAACTCTCTTGGTCAACCGTTCTCGTGACTTTGTGATTTCTTCTGATGGTAACAAAGTACCTATCTCTGAACTTGAGGGGAAGACAGTGGGTCTATATTTCTCATTGTTTTCATACAATCTAAGCACTGACTTTACTCCAAAGCTCGTTGAGGTTTATAAGAAGTTGAAAGCGAAGGGTGAGAGTTTTGAGGTTGTGTTGATTCCCCtggatgatgaagaagagtCAATCAAGCAACAAATAAAAGGCTTGCCTTTGTTGTCACTACCTATCAAGGACAAGAGCTGTCAGAAGCTGGCTCGGTACTTTGAGCTCTCGACCCTGCCCACCGTGGTTATTATTGGGCCAGATGGGAAGACTCTCCATCCCAATGTTGCTGAGGCCATTGAGGAACATGGGGTTATTGCATACCCTTTCACTTCTGAAAAGTTTGCGGAGCTTGTTGAGATAGAGAAGGCCAAAGAGGAAGCTCAAACCGTTGAATCAATTTTAGTTTCTGGGGATCTAGATTTTGTCATCGGGAAAGATGGTGTCAAGATTCCTGTATCAGATTTAGTGGGGAAGAACATCCTCTTGTACTTCTCAGCCCATTGGTGTCCTCCATGCCGCGCTTTCTTGCCAAAACTTATTGAAACATATCACGAGATTAAGGCGAAAGATAATGCgtttgaaattatattcatCTCAAGTGACAGGGATCAGGCCTCGTTTGATGAATTCTTTGCAGGAATGCCATGGTTGGCACTCCCCTTTGGTGACTCGAGGAAGTCATTCCTAAGTCGCAAATTCAAGGTACAAGGAATCCCCACGGCTGTGGCCATTGGACCAAGTGGTAAGACGGTCACAAAAGAAGCTGGAGATCTCATTAAGCTTCATGGGGCAGAGGCATATCCTTTCACAGACGAGAGAATAAAAGCATTGGAGGCGGAATATGAAGAGATGGCAAAGGGGTGGCCTGAGAAGTTGACACGTGCCAGCCATGAGCATGAGCTTGTGTTAACTCGCCGTGTGAATTATGTTTGTGATGGTTGTGATGAGGGGGGACATAAATGGTCATACTACTGTGATGAGTGTGACTATGATCTACATCCAAAATGTGCATTGGAGGACGGAGACAGAGATGGATGGGTTTGTGATGGGGAAGTCTGCACTAAAGCCTG 1676 0.4379 MAGSEGVVQHDVQSLFSSSERDYLIRNNGDQVKTESLKGKKLGLYFSASWCGPCQRFTPNLVEVYKEASPNGDFEVIFLSADEDDEAFNRYFAKMPWLAIPFSDSDTRNRLDELFEVRGIPNLVILDENGKVVTEDGVEVIREYGIEGYPFSSERINELKEQEEEARKNQSLKTLLVNRSRDFVISSDGNKVPISELEGKTVGLYFSLFSYNLSTDFTPKLVEVYKKLKAKGESFEVVLIPLDDEEESIKQQIKGLPLLSLPIKDKSCQKLARYFELSTLPTVVIIGPDGKTLHPNVAEAIEEHGVIAYPFTSEKFAELVEIEKAKEEAQTVESILVSGDLDFVIGKDGVKIPVSDLVGKNILLYFSAHWCPPCRAFLPKLIETYHEIKAKDNAFEIIFISSDRDQASFDEFFAGMPWLALPFGDSRKSFLSRKFKVQGIPTAVAIGPSGKTVTKEAGDLIKLHGAEAYPFTDERIKALEAEYEEMAKGWPEKLTRASHEHELVLTRRVNYVCDGCDEGGHKWSYYCDECDYDLHPKCALEDGDRDGWVCDGEVCTKA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01333 558 ProSiteProfiles Thioredoxin domain profile. 323 481 IPR013766 -
Bva08g01333 558 PANTHER THIOREDOXIN 8 540 - -
Bva08g01333 558 CDD TryX_like_TryX_NRX 22 151 IPR045870 GO:0004791
Bva08g01333 558 PANTHER NUCLEOREDOXIN 1-2-RELATED 8 540 - -
Bva08g01333 558 Pfam Thioredoxin-like 360 451 IPR012336 -
Bva08g01333 558 Pfam Thioredoxin-like 40 132 IPR012336 -
Bva08g01333 558 Pfam Thioredoxin-like 199 291 IPR012336 -
Bva08g01333 558 ProSiteProfiles Thioredoxin domain profile. 1 161 IPR013766 -
Bva08g01333 558 SUPERFAMILY Thioredoxin-like 24 133 IPR036249 -
Bva08g01333 558 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Bva08g01333 558 SUPERFAMILY Cysteine-rich domain 490 540 IPR046349 -
Bva08g01333 558 CDD TryX_like_TryX_NRX 342 471 IPR045870 GO:0004791
Bva08g01333 558 Pfam C1 domain 498 539 IPR004146 -
Bva08g01333 558 SUPERFAMILY Thioredoxin-like 185 294 IPR036249 -
Bva08g01333 558 Gene3D Glutaredoxin 173 313 - -
Bva08g01333 558 Gene3D Glutaredoxin 15 153 - -
Bva08g01333 558 Gene3D Glutaredoxin 337 473 - -
Bva08g01333 558 SUPERFAMILY Thioredoxin-like 345 458 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01333 Bva-Chr8 6963668 6966315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01333 K17609 - qsu:111996468 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01333 08 6963668 6966315 Bva08g01333 08 6963668 6966315 ECH