Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01330 ATGAACATCAAACACTTGATGCCTATAAGCGTGGTCACTCTTCTCTTGAATATTACAGCTGTAGCCGTCGCACCCGTCGGAATCTGCTATGGCCGTATTGCCAACAACCTCCCGCCTCCCACCGTCATCGTCAATATTCTCAAATCCAACTCCATCTCCTATCTCCGTCTCTTTAACACCGATCCCGCCACCCTCCAATCCTTCGCCGGCACCGGAATCCTCCTAACCATCGGCGTTCCGAACGAAATCCTCCCTTTCCTGGCCTCCTCCGCCAACAACGCTGCCCTCAATTGGCTCCAATCTAACGTCTTCACCAACATACCAGCTAATCAAGTCCGTTACATCGCCGTCGGAAACGAAATTTTCCACAAAGATCCATTCTATACTCCACACCTCCTTCCCGCTATTTTCAATCTCCACCAAGCTCTACAAACTCTAGGCCTGTCCGATTCAATCAAGCTCTCCACTCCACTAGCAGCCACGGTTCTCGCCAATTCGTTCCCTCCATCTTCTGGAACCTTAGACCCACACCTAAGATCCGACGTTGTTCCTCTCCTACAGTTCCTCCAGAAGACTCAATCTCCACTTATGCTCAATGTTTACCCCTACTTCAGCTACATTAACGATAGAACTCACGTTTCATTGGATTATGCTTTGTCTCGGTTAGAGAATCCAGTTCTTGACGGTTCATTGCAGTATCGGAGTCTTCTAGATGCGAACATCGATGCCCTGGTCTATGCAATGGAGAGAGAGGGTTTCGAGGGATTGCCCGTGGTGGTGACGGAGACAGGGTGGCCGACGAGCGGAGGAGAGGCAGCAAATGTGGAGAATGCGGCGGCGTACAATGGGAATGTTTTGACTCAGGCGAGAAACGGCGTCGGAACACCCAGAAAGCCTGGGATTGAGTTGGAAGTATACCTGTTTGATCTGTTTGATGAAAATGAGAAGGTTGGAGAGGAGTTTGAGAGACACTTTGGGATTTTTGGGGTTAATGGTGTGAAGGCCTATGATCTAAGATTCAATTG 1025 0.4946 MNIKHLMPISVVTLLLNITAVAVAPVGICYGRIANNLPPPTVIVNILKSNSISYLRLFNTDPATLQSFAGTGILLTIGVPNEILPFLASSANNAALNWLQSNVFTNIPANQVRYIAVGNEIFHKDPFYTPHLLPAIFNLHQALQTLGLSDSIKLSTPLAATVLANSFPPSSGTLDPHLRSDVVPLLQFLQKTQSPLMLNVYPYFSYINDRTHVSLDYALSRLENPVLDGSLQYRSLLDANIDALVYAMEREGFEGLPVVVTETGWPTSGGEAANVENAAAYNGNVLTQARNGVGTPRKPGIELEVYLFDLFDENEKVGEEFERHFGIFGVNGVKAYDLRFN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01330 341 Gene3D Glycosidases 24 341 - -
Bva08g01330 341 SUPERFAMILY (Trans)glycosidases 26 338 IPR017853 -
Bva08g01330 341 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 340 IPR044965 GO:0004553|GO:0005975
Bva08g01330 341 PANTHER GLUCAN ENDO-13-BETA-GLUCOSIDASE BG4-RELATED 17 340 - -
Bva08g01330 341 Pfam Glycosyl hydrolases family 17 26 340 IPR000490 GO:0004553|GO:0005975
Bva08g01330 341 ProSitePatterns Glycosyl hydrolases family 17 signature. 256 269 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01330 Bva-Chr8 6949887 6951128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01330 26 340 Glycoside Hydrolase AT4G26830 44.860 2.59e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01330 - - qsu:112031101 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01330 08 6949887 6951128 Bva08g01330 08 6949887 6951128 ECH