Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01313 ATGCACGTTGTGATGGTGAGGGAGGAAAGGAAACGTACGAAGAGACCTATACAACTTGATTGGGATGCTCTCCTGCACAATAAAGAAGACGATGCTCCAGTTGAATTGGTTGTTGAAACTGCTTCCAACACCGCCTCTTCTACCTCTCAATCGCAGAATAGCTGGACTGCGGGCTTCGATCGGCAATTTTCCTCGGGAGACAGCGTTGAACTGATGGACGATCACAGTCTTGTGGAGGCGATTCTCAGTAAGAAACGCACACTGGAGAATACAGGTCGCAAATTACCTGACAAAGGGGAGAAGCTTCAGGTCGCCATCAAGCGCTTGGAAGAGGAGTGGGAACGGAGGAAAAAGAGACGACACGAGAAgGAAGATGATAATAATGAGAATCCCAGACAAGCTGCCAGATCAAGTACTGTTGGTATGCCTAAAGGCTTGAAAGAAGAGAGTATGTCATCTCAAGCTCGCTCACAGTCCTCATCATTTgtgacattattttataagaaaatggaagaaGCAACTCGTCCGAGAATGAAGGATCATTGTAAAGAGTTGTCGGTTTTAAATCATTGTAACAAACAGAATAGAACCAACAACAGAGAACTTTCAgagaatggaagaaagaaagatcaaCCATCTTCAAGGACATTGCCTTTTCAATGTCCTAGCAATCTTTCCAAACGTTATTTGTCAAATGATGGTAAAAGTAGGAAGCATGCTTCTCAAGAAATTCAAACCGATGACTCAAGGTCCAGGAAGGGTGACCCCATTGTTCTTGATGTTGAGGATGAATTTCATCCTCTGGAGGAAAAAGAGCAAGAAGACAAACTTGCTGACTGTCTGAAGAAAGCTAAGATATATTATCCTTCAAGTAATGATGCAGAAGCTATCGAAATCTATTACACAGACATAGAATGCCTTGCTCCTGAACGTTACCTGACCTGTACTATAATGAACTTTTACATACGATATCTACAGCAGCAAGCATCTACGACAAATAGATCAATACCtgattatcattttttcaatacatatttttacaACAAGCTAAAAGAGGCCGTTTCCTGCAAGCAAAGTGAAAGGGAGACATTCTTTCTGACGTTCAGAAGGTGGTGGAAGGGTGTCAATATTTTTCAGAAGTCTTATCTTCTAATTCCAATACATGAGGATCTACATTGGAGCTTGGTCATTATTTGCATCCCAGACAAAGAAGACGATACAGGTCCAATCATCCTTCATTTGGATTCATTGGGTTTTCACTCAAGTGCACCcgtttttaacaaaataagaagCTTTCTGAGAGAAGAATGGAGCTATTTGGACCGAGAATGCCAGTCTTCTGATATTCCAATATCATCAAAAATATGGAAGAATCTTCCTCGTAgaattgatgataaaattgtCCCGGTTCCCCAACAGATGAACGACTATGACTGTGGTGTTTTTGTACTCTACTTCATTGAGCGTTTCATTGAAGATGCTCCTCAAAGACTGAAAAAGGAAGATTTGGCGatgTTTGGCAAGAAGTGGTTCAAACCTGAAGAGGCATCCAATTTGAGAGGGAAGATCCGTAAGTTACTTAGTGaggaatttgaaaattctctCAAGGACGACTGTGTCTTAAAATCTTCTCCTCTGCAGTCTCCTGAGTTGGAATGTGTCGAGACCAGCACTAGTGATTCCTG 1685 0.3911 MHVVMVREERKRTKRPIQLDWDALLHNKEDDAPVELVVETASNTASSTSQSQNSWTAGFDRQFSSGDSVELMDDHSLVEAILSKKRTLENTGRKLPDKGEKLQVAIKRLEEEWERRKKRRHEKEDDNNENPRQAARSSTVGMPKGLKEESMSSQARSQSSSFVTLFYKKMEEATRPRMKDHCKELSVLNHCNKQNRTNNRELSENGRKKDQPSSRTLPFQCPSNLSKRYLSNDGKSRKHASQEIQTDDSRSRKGDPIVLDVEDEFHPLEEKEQEDKLADCLKKAKIYYPSSNDAEAIEIYYTDIECLAPERYLTCTIMNFYIRYLQQQASTTNRSIPDYHFFNTYFYNKLKEAVSCKQSERETFFLTFRRWWKGVNIFQKSYLLIPIHEDLHWSLVIICIPDKEDDTGPIILHLDSLGFHSSAPVFNKIRSFLREEWSYLDRECQSSDIPISSKIWKNLPRRIDDKIVPVPQQMNDYDCGVFVLYFIERFIEDAPQRLKKEDLAMFGKKWFKPEEASNLRGKIRKLLSEEFENSLKDDCVLKSSPLQSPELECVETSTSDS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01313 561 MobiDBLite consensus disorder prediction 212 230 - -
Bva08g01313 561 MobiDBLite consensus disorder prediction 114 131 - -
Bva08g01313 561 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 68 547 - -
Bva08g01313 561 Coils Coil 106 126 - -
Bva08g01313 561 ProSiteProfiles Ubiquitin-like protease family profile. 297 490 IPR003653 GO:0006508|GO:0008234
Bva08g01313 561 MobiDBLite consensus disorder prediction 191 257 - -
Bva08g01313 561 Pfam Ulp1 protease family, C-terminal catalytic domain 312 514 IPR003653 GO:0006508|GO:0008234
Bva08g01313 561 PANTHER UBIQUITIN-LIKE PROTEASE 4 68 547 - -
Bva08g01313 561 MobiDBLite consensus disorder prediction 231 257 - -
Bva08g01313 561 SUPERFAMILY Cysteine proteinases 285 529 IPR038765 -
Bva08g01313 561 MobiDBLite consensus disorder prediction 114 160 - -
Bva08g01313 561 Gene3D - 339 467 - -
Bva08g01313 561 Gene3D - 288 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01313 Bva-Chr8 6872303 6881945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01313 K16287 - jre:109013697 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01313 08 6872303 6881945 Bva08g01313 08 6872303 6881945 ECH