Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01301 ATGGGCAAGAATCTGCTGGTGTTGGGTCTCACTGTTTTGGTTCTATTTGAAGGCGTCTCTTCAGCAGCATCTACTTCGCCCCCTGCGAAAATTGTTAGTGGCTTTGTCTCAAGTGCTTTGCCTGCTTTGACAAAATGGTTGTGGTCACTGAAATCTACTACTAAAACAGCGGTTACTGGCCGTTCGACGGTGAAGTTCGAGAGTGGATATACTGTGGAGACGGTGTTTGATGGAAGCAAGCTTGGAATCGAGCCTTACGCTGTTGAGGTGTTGCCCAGTGGGGAGCTTCTGATTCTGGATTCAGCTAATAGTAATATTTACAGGATTTCCTCCTCGCTTTCTATATATAATAGACCAAAGCTGGTGGCGGGATCTGCTGAAGGATATTCTGGGCATGTTGATGGGAAGCTTAGGGAGGCAAGGATGAATCATCCAAAGGGGGTAACTGTTGATGACCGAGGAAATATCTATGTCGCAGATACTATGAATATGGCAATTAGGAAAATCAGTGAGTCAGGGGTCACCACTATTGCTGGAGGAAAATGGAGCCGTGGAGGGGGCCATGTTGATGGACCAAGTGATGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTACGTCGGAAGCAGTTGTTCCCTACTCATAATAGACAGAGGAAACCGAGCTATAAGGGAGATCCAACTTCATTTTGATGACTGTGCTTATCAATATGGAAGTGGATTTCCACTTGGGATTGCGATGCTTGTTGCGGCTGGCTTCTTTGGTTATATGATGGCATTGCTGCAACGTAGAGTTAGCACAATTGTAGCATCGCAGGACGATCAGGAAGCAAGTCCATATCAGAAGCCCTTGAAATCTGTCAGGCCTCCTTTAATTCCAACAGAAGATGAGCCTGATAAGCAGGAAGAAGGTTTCTTTGGATCCATTGGGAAGCTTCTTACTAACGCTGGGGCATCAATGGTGGAGATAATGGGGGGAATATTTCCTGGTTTTAGGAAAAAGCCCGTGAGCTACCAATTTCAAAGCCAGCCGCTGTTCCAGCAACAGCAAAGACATGTCAATGCTTGGCCCGTGCAGGAAAGTTTTGTGATTCCTGATGAAGATGACCCTCCTTCTATTGACACAAGAAGCCCAACCCCTCGGAAAACATATGCTTTCATGTCCAAGGATTCAGAAAAAATGCAACAACTGCGTCAAAGTCGAGCTTTCTATAGTGGATGGGAGGGAGATTTTCAGCAGCAACATCAACAGCAACTGCACCAGCAACAGAAACACCATCATCGTCATCAGTATCGTTCCTCAATCCCTCACACTTACTATGAGCAAAACAATGAgacaaccaatgaaatagtctTTGGGGCAGTGCAGGAGCAGGATGTGAAGCGTGAAACCGTGGTCATTAAGCCTGTGGATTATGGTGACTCCCTGTATGAGCATCACAATATTCGATCTCGAATCAGTTCTATGGGCTATACCCACAGGTATTA 1487 0.4506 MGKNLLVLGLTVLVLFEGVSSAASTSPPAKIVSGFVSSALPALTKWLWSLKSTTKTAVTGRSTVKFESGYTVETVFDGSKLGIEPYAVEVLPSGELLILDSANSNIYRISSSLSIYNRPKLVAGSAEGYSGHVDGKLREARMNHPKGVTVDDRGNIYVADTMNMAIRKISESGVTTIAGGKWSRGGGHVDGPSDEAKFSDDFDVVYVGSSCSLLIIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVAAGFFGYMMALLQRRVSTIVASQDDQEASPYQKPLKSVRPPLIPTEDEPDKQEEGFFGSIGKLLTNAGASMVEIMGGIFPGFRKKPVSYQFQSQPLFQQQQRHVNAWPVQESFVIPDEDDPPSIDTRSPTPRKTYAFMSKDSEKMQQLRQSRAFYSGWEGDFQQQHQQQLHQQQKHHHRHQYRSSIPHTYYEQNNETTNEIVFGAVQEQDVKRETVVIKPVDYGDSLYEHHNIRSRISSMGYTHRY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01301 495 MobiDBLite consensus disorder prediction 276 301 - -
Bva08g01301 495 ProSiteProfiles NHL repeat profile. 143 172 IPR001258 GO:0005515
Bva08g01301 495 PANTHER - 1 495 - -
Bva08g01301 495 SUPERFAMILY NHL repeat 69 229 - -
Bva08g01301 495 PANTHER NHL REPEAT PROTEIN 1 495 - -
Bva08g01301 495 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Bva08g01301 495 Gene3D - 25 227 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01301 Bva-Chr8 6802012 6805401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01301 - - gmx:100781836 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01301 08 6802012 6805401 Bva08g01301 08 6802012 6805401 ECH